Cluster: MGYG000003403_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003403
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003403_12 | MGYG000003403_12_129 | 134562 | 135197 | - | 1.A.12.3.1 |
| pfam | MGYG000003403_12 | MGYG000003403_12_130 | 135332 | 136081 | - | Cytochrom_C1 |
| TC | MGYG000003403_12 | MGYG000003403_12_131 | 136074 | 137333 | - | 3.D.3.1.1 |
| TC | MGYG000003403_12 | MGYG000003403_12_132 | 137333 | 137953 | - | 3.D.3.1.1 |
| CAZyme | MGYG000003403_12 | MGYG000003403_12_133 | 138174 | 139094 | - | GH23 |
Gene ID: MGYG000003403_12_129
Type: TC
Location: 134562 - 135197 (-)
Type: TC
Location: 134562 - 135197 (-)
Gene ID: MGYG000003403_12_130
Type: pfam
Location: 135332 - 136081 (-)
Type: pfam
Location: 135332 - 136081 (-)
Gene ID: MGYG000003403_12_131
Type: TC
Location: 136074 - 137333 (-)
Type: TC
Location: 136074 - 137333 (-)
Gene ID: MGYG000003403_12_132
Type: TC
Location: 137333 - 137953 (-)
Type: TC
Location: 137333 - 137953 (-)
Gene ID: MGYG000003403_12_133
Type: CAZyme
Location: 138174 - 139094 (-)
Type: CAZyme
Location: 138174 - 139094 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.