Cluster: MGYG000003403_CGC11
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003403
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003403_5 | MGYG000003403_5_226 | 253573 | 256020 | - | 3.A.7.2.1 |
| pfam | MGYG000003403_5 | MGYG000003403_5_227 | 256103 | 256369 | - | VirB3 |
| TC | MGYG000003403_5 | MGYG000003403_5_228 | 256404 | 256808 | - | 3.A.7.3.1 |
| CAZyme | MGYG000003403_5 | MGYG000003403_5_229 | 256882 | 257865 | - | GH23 |
| TC | MGYG000003403_5 | MGYG000003403_5_230 | 257869 | 258912 | - | 3.A.7.3.1 |
| TC | MGYG000003403_5 | MGYG000003403_5_231 | 258927 | 260180 | - | 3.A.7.5.1 |
| TC | MGYG000003403_5 | MGYG000003403_5_232 | 260177 | 260956 | - | 3.A.7.2.1 |
| pfam | MGYG000003403_5 | MGYG000003403_5_233 | 260953 | 262002 | - | VirB8 |
| NULL(UNKNOWN) | MGYG000003403_5 | MGYG000003403_5_234 | 262092 | 262763 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003403_5 | MGYG000003403_5_235 | 262966 | 264645 | - | 3.A.7.1.1 |
| NULL(UNKNOWN) | MGYG000003403_5 | MGYG000003403_5_236 | 264682 | 264939 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000003403_5 | MGYG000003403_5_237 | 265166 | 265489 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003403_5 | MGYG000003403_5_238 | 265616 | 266827 | + | 2.A.1.2.65 |
Gene ID: MGYG000003403_5_226
Type: TC
Location: 253573 - 256020 (-)
Type: TC
Location: 253573 - 256020 (-)
Gene ID: MGYG000003403_5_227
Type: pfam
Location: 256103 - 256369 (-)
Type: pfam
Location: 256103 - 256369 (-)
Gene ID: MGYG000003403_5_228
Type: TC
Location: 256404 - 256808 (-)
Type: TC
Location: 256404 - 256808 (-)
Gene ID: MGYG000003403_5_229
Type: CAZyme
Location: 256882 - 257865 (-)
Type: CAZyme
Location: 256882 - 257865 (-)
Gene ID: MGYG000003403_5_230
Type: TC
Location: 257869 - 258912 (-)
Type: TC
Location: 257869 - 258912 (-)
Gene ID: MGYG000003403_5_231
Type: TC
Location: 258927 - 260180 (-)
Type: TC
Location: 258927 - 260180 (-)
Gene ID: MGYG000003403_5_232
Type: TC
Location: 260177 - 260956 (-)
Type: TC
Location: 260177 - 260956 (-)
Gene ID: MGYG000003403_5_233
Type: pfam
Location: 260953 - 262002 (-)
Type: pfam
Location: 260953 - 262002 (-)
Gene ID: MGYG000003403_5_234
Type:
Location: 262092 - 262763 (-)
Type:
Location: 262092 - 262763 (-)
Gene ID: MGYG000003403_5_235
Type: TC
Location: 262966 - 264645 (-)
Type: TC
Location: 262966 - 264645 (-)
Gene ID: MGYG000003403_5_236
Type:
Location: 264682 - 264939 (-)
Type:
Location: 264682 - 264939 (-)
Gene ID: MGYG000003403_5_237
Type:
Location: 265166 - 265489 (+)
Type:
Location: 265166 - 265489 (+)
Gene ID: MGYG000003403_5_238
Type: TC
Location: 265616 - 266827 (+)
Type: TC
Location: 265616 - 266827 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.