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Cluster: MGYG000003400_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003400_14 MGYG000003400_14_49 47817 49460 - 4.C.1.1.7
TF MGYG000003400_14 MGYG000003400_14_50 49591 50265 + GerE
TC MGYG000003400_14 MGYG000003400_14_51 50269 53598 - 2.A.21.9.2
pfam MGYG000003400_14 MGYG000003400_14_52 53634 54107 - MaoC_dehydratas | FAS1_DH_region
peptidase MGYG000003400_14 MGYG000003400_14_53 54104 54982 - S33.UPW
TC MGYG000003400_14 MGYG000003400_14_54 54994 57192 - 1.B.14.8.2
CAZyme MGYG000003400_14 MGYG000003400_14_55 57392 58396 + CE1
peptidase MGYG000003400_14 MGYG000003400_14_56 58522 59688 + S12.006
pfam MGYG000003400_14 MGYG000003400_14_57 59702 60949 - Na_sulph_symp | ArsB | CitMHS
TC MGYG000003400_14 MGYG000003400_14_58 60963 62198 - 2.A.1.2.71
Gene ID: MGYG000003400_14_49
Type: TC
Location: 47817 - 49460 (-)
Gene ID: MGYG000003400_14_50
Type: TF
Location: 49591 - 50265 (+)
Gene ID: MGYG000003400_14_51
Type: TC
Location: 50269 - 53598 (-)
Gene ID: MGYG000003400_14_52
Type: pfam
Location: 53634 - 54107 (-)
Gene ID: MGYG000003400_14_53
Type: peptidase
Location: 54104 - 54982 (-)
Gene ID: MGYG000003400_14_54
Type: TC
Location: 54994 - 57192 (-)
Gene ID: MGYG000003400_14_55
Type: CAZyme
Location: 57392 - 58396 (+)
Gene ID: MGYG000003400_14_56
Type: peptidase
Location: 58522 - 59688 (+)
Gene ID: MGYG000003400_14_57
Type: pfam
Location: 59702 - 60949 (-)
Gene ID: MGYG000003400_14_58
Type: TC
Location: 60963 - 62198 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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