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Cluster: MGYG000003400_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003400_6 MGYG000003400_6_45 45033 47657 - 2.A.21.9.2
pfam MGYG000003400_6 MGYG000003400_6_46 47748 48914 - Porin_O_P
TC MGYG000003400_6 MGYG000003400_6_47 49244 50587 + 2.A.23.1.3
pfam MGYG000003400_6 MGYG000003400_6_48 50818 53109 + malic | PTA_PTB | Malic_M
CAZyme MGYG000003400_6 MGYG000003400_6_49 53494 56838 - GH92
pfam MGYG000003400_6 MGYG000003400_6_50 57227 57424 + zf-CHCC
CAZyme MGYG000003400_6 MGYG000003400_6_51 57440 58555 + GT4
pfam MGYG000003400_6 MGYG000003400_6_52 58536 59867 + Wzy_C
pfam MGYG000003400_6 MGYG000003400_6_53 59962 60879 - Lip_A_acyltrans
CAZyme MGYG000003400_6 MGYG000003400_6_54 60940 62238 + GT30
NULL(UNKNOWN) MGYG000003400_6 MGYG000003400_6_55 62457 63698 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000003400_6 MGYG000003400_6_56 63793 65151 - 2.A.6.2.27
pfam MGYG000003400_6 MGYG000003400_6_57 65168 65815 - RrnaAD | PCMT | CMAS | Methyltransf_11 | Methyltransf_25
STP MGYG000003400_6 MGYG000003400_6_58 65956 66633 - TetR_N
TC MGYG000003400_6 MGYG000003400_6_59 66751 67881 + 2.A.6.2.27
TC MGYG000003400_6 MGYG000003400_6_60 67886 71047 + 2.A.6.2.17
Gene ID: MGYG000003400_6_45
Type: TC
Location: 45033 - 47657 (-)
Gene ID: MGYG000003400_6_46
Type: pfam
Location: 47748 - 48914 (-)
Gene ID: MGYG000003400_6_47
Type: TC
Location: 49244 - 50587 (+)
Gene ID: MGYG000003400_6_48
Type: pfam
Location: 50818 - 53109 (+)
Gene ID: MGYG000003400_6_49
Type: CAZyme
Location: 53494 - 56838 (-)
Gene ID: MGYG000003400_6_50
Type: pfam
Location: 57227 - 57424 (+)
Gene ID: MGYG000003400_6_51
Type: CAZyme
Location: 57440 - 58555 (+)
Gene ID: MGYG000003400_6_52
Type: pfam
Location: 58536 - 59867 (+)
Gene ID: MGYG000003400_6_53
Type: pfam
Location: 59962 - 60879 (-)
Gene ID: MGYG000003400_6_54
Type: CAZyme
Location: 60940 - 62238 (+)
Gene ID: MGYG000003400_6_55
Type:
Location: 62457 - 63698 (+)
Gene ID: MGYG000003400_6_56
Type: TC
Location: 63793 - 65151 (-)
Gene ID: MGYG000003400_6_57
Type: pfam
Location: 65168 - 65815 (-)
Gene ID: MGYG000003400_6_58
Type: STP
Location: 65956 - 66633 (-)
Gene ID: MGYG000003400_6_59
Type: TC
Location: 66751 - 67881 (+)
Gene ID: MGYG000003400_6_60
Type: TC
Location: 67886 - 71047 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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