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Cluster: MGYG000003400_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003400_51 MGYG000003400_51_62 62360 63544 - 3.A.1.115.2
TC MGYG000003400_51 MGYG000003400_51_63 63541 64287 - 3.A.1.115.1
peptidase MGYG000003400_51 MGYG000003400_51_64 64284 65810 - S33.UPW
TC MGYG000003400_51 MGYG000003400_51_65 65879 67081 - 9.B.34.1.2
pfam MGYG000003400_51 MGYG000003400_51_66 67235 67762 + DUF1203
CAZyme MGYG000003400_51 MGYG000003400_51_67 67954 69123 + AA10 | CBM73
pfam MGYG000003400_51 MGYG000003400_51_68 69236 69946 - NAD_binding_1 | FAD_binding_6
TC MGYG000003400_51 MGYG000003400_51_69 70070 71038 + 3.A.1.105.17
TC MGYG000003400_51 MGYG000003400_51_70 71035 71826 + 3.A.1.105.17
Gene ID: MGYG000003400_51_62
Type: TC
Location: 62360 - 63544 (-)
Gene ID: MGYG000003400_51_63
Type: TC
Location: 63541 - 64287 (-)
Gene ID: MGYG000003400_51_64
Type: peptidase
Location: 64284 - 65810 (-)
Gene ID: MGYG000003400_51_65
Type: TC
Location: 65879 - 67081 (-)
Gene ID: MGYG000003400_51_66
Type: pfam
Location: 67235 - 67762 (+)
Gene ID: MGYG000003400_51_67
Type: CAZyme
Location: 67954 - 69123 (+)
Gene ID: MGYG000003400_51_68
Type: pfam
Location: 69236 - 69946 (-)
Gene ID: MGYG000003400_51_69
Type: TC
Location: 70070 - 71038 (+)
Gene ID: MGYG000003400_51_70
Type: TC
Location: 71035 - 71826 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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