Cluster: MGYG000003400_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003400
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003400_21 | MGYG000003400_21_293 | 325135 | 325521 | - | 1.E.55.2.3 |
| NULL(UNKNOWN) | MGYG000003400_21 | MGYG000003400_21_294 | 325735 | 325905 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003400_21 | MGYG000003400_21_295 | 325966 | 328011 | - | 1.B.14.1.4 |
| CAZyme | MGYG000003400_21 | MGYG000003400_21_296 | 328506 | 330431 | + | GT2 |
| peptidase | MGYG000003400_21 | MGYG000003400_21_297 | 330482 | 331141 | + | S09.UPW |
| TC | MGYG000003400_21 | MGYG000003400_21_298 | 331145 | 332188 | + | 8.A.59.2.1 |
Gene ID: MGYG000003400_21_293
Type: TC
Location: 325135 - 325521 (-)
Type: TC
Location: 325135 - 325521 (-)
Gene ID: MGYG000003400_21_294
Type:
Location: 325735 - 325905 (+)
Type:
Location: 325735 - 325905 (+)
Gene ID: MGYG000003400_21_295
Type: TC
Location: 325966 - 328011 (-)
Type: TC
Location: 325966 - 328011 (-)
Gene ID: MGYG000003400_21_296
Type: CAZyme
Location: 328506 - 330431 (+)
Type: CAZyme
Location: 328506 - 330431 (+)
Gene ID: MGYG000003400_21_297
Type: peptidase
Location: 330482 - 331141 (+)
Type: peptidase
Location: 330482 - 331141 (+)
Gene ID: MGYG000003400_21_298
Type: TC
Location: 331145 - 332188 (+)
Type: TC
Location: 331145 - 332188 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas sp003028475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.