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Cluster: MGYG000003399_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003399_22 MGYG000003399_22_24 29754 30920 + 2.A.1.2.39
TC MGYG000003399_22 MGYG000003399_22_25 31119 32075 + 3.A.1.17.2
TF MGYG000003399_22 MGYG000003399_22_26 32334 33068 + HTH_6
CAZyme MGYG000003399_22 MGYG000003399_22_27 33203 34633 + GH1
pfam MGYG000003399_22 MGYG000003399_22_28 34698 35876 - FAD_binding_3
TC MGYG000003399_22 MGYG000003399_22_29 35889 37244 - 2.A.1.15.1
STP MGYG000003399_22 MGYG000003399_22_30 37640 38977 - PALP
TC MGYG000003399_22 MGYG000003399_22_31 39087 39776 - 2.A.89.3.8
pfam MGYG000003399_22 MGYG000003399_22_32 39804 40277 - 3-dmu-9_3-mt
TC MGYG000003399_22 MGYG000003399_22_33 40289 40639 - 3.A.5.1.1
TC MGYG000003399_22 MGYG000003399_22_34 40744 42186 - 9.B.34.1.2
TC MGYG000003399_22 MGYG000003399_22_35 42575 44713 + 1.B.14.1.2
peptidase MGYG000003399_22 MGYG000003399_22_36 44718 45566 - S33.UPW
NULL(UNKNOWN) MGYG000003399_22 MGYG000003399_22_37 45681 45863 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000003399_22 MGYG000003399_22_38 45912 48341 - 1.A.23.1.1
TC MGYG000003399_22 MGYG000003399_22_39 48792 50522 + 3.A.1.121.3
pfam MGYG000003399_22 MGYG000003399_22_40 50862 51707 + Inositol_P
TC MGYG000003399_22 MGYG000003399_22_41 51650 53026 - 2.A.4.7.5
NULL(UNKNOWN) MGYG000003399_22 MGYG000003399_22_42 53053 53232 - NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000003399_22 MGYG000003399_22_43 53340 53432 - MgtS-like
TC MGYG000003399_22 MGYG000003399_22_44 53565 54587 - 1.A.26.1.4
TC MGYG000003399_22 MGYG000003399_22_45 54979 56598 - 3.A.1.5.1
NULL(UNKNOWN) MGYG000003399_22 MGYG000003399_22_46 56773 57042 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) MGYG000003399_22 MGYG000003399_22_47 57751 58326 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000003399_22 MGYG000003399_22_48 58601 59617 + 3.A.1.10.1
TC MGYG000003399_22 MGYG000003399_22_49 59651 61234 + 3.A.1.10.1
TC MGYG000003399_22 MGYG000003399_22_50 61231 62268 + 3.A.1.10.1
Gene ID: MGYG000003399_22_24
Type: TC
Location: 29754 - 30920 (+)
Gene ID: MGYG000003399_22_25
Type: TC
Location: 31119 - 32075 (+)
Gene ID: MGYG000003399_22_26
Type: TF
Location: 32334 - 33068 (+)
Gene ID: MGYG000003399_22_27
Type: CAZyme
Location: 33203 - 34633 (+)
Gene ID: MGYG000003399_22_28
Type: pfam
Location: 34698 - 35876 (-)
Gene ID: MGYG000003399_22_29
Type: TC
Location: 35889 - 37244 (-)
Gene ID: MGYG000003399_22_30
Type: STP
Location: 37640 - 38977 (-)
Gene ID: MGYG000003399_22_31
Type: TC
Location: 39087 - 39776 (-)
Gene ID: MGYG000003399_22_32
Type: pfam
Location: 39804 - 40277 (-)
Gene ID: MGYG000003399_22_33
Type: TC
Location: 40289 - 40639 (-)
Gene ID: MGYG000003399_22_34
Type: TC
Location: 40744 - 42186 (-)
Gene ID: MGYG000003399_22_35
Type: TC
Location: 42575 - 44713 (+)
Gene ID: MGYG000003399_22_36
Type: peptidase
Location: 44718 - 45566 (-)
Gene ID: MGYG000003399_22_37
Type:
Location: 45681 - 45863 (+)
Gene ID: MGYG000003399_22_38
Type: TC
Location: 45912 - 48341 (-)
Gene ID: MGYG000003399_22_39
Type: TC
Location: 48792 - 50522 (+)
Gene ID: MGYG000003399_22_40
Type: pfam
Location: 50862 - 51707 (+)
Gene ID: MGYG000003399_22_41
Type: TC
Location: 51650 - 53026 (-)
Gene ID: MGYG000003399_22_42
Type:
Location: 53053 - 53232 (-)
Gene ID: MGYG000003399_22_43
Type: pfam
Location: 53340 - 53432 (-)
Gene ID: MGYG000003399_22_44
Type: TC
Location: 53565 - 54587 (-)
Gene ID: MGYG000003399_22_45
Type: TC
Location: 54979 - 56598 (-)
Gene ID: MGYG000003399_22_46
Type:
Location: 56773 - 57042 (-)
Gene ID: MGYG000003399_22_47
Type:
Location: 57751 - 58326 (+)
Gene ID: MGYG000003399_22_48
Type: TC
Location: 58601 - 59617 (+)
Gene ID: MGYG000003399_22_49
Type: TC
Location: 59651 - 61234 (+)
Gene ID: MGYG000003399_22_50
Type: TC
Location: 61231 - 62268 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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