Cluster: MGYG000003399_CGC40
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003399
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003399_21 | MGYG000003399_21_386 | 419567 | 421192 | - | AA3 |
| TF | MGYG000003399_21 | MGYG000003399_21_387 | 421301 | 422227 | - | HTH_1 |
| TC | MGYG000003399_21 | MGYG000003399_21_388 | 422326 | 423828 | - | 2.A.1.6.4 |
| pfam | MGYG000003399_21 | MGYG000003399_21_389 | 424235 | 425602 | - | OEP | OEP |
| TC | MGYG000003399_21 | MGYG000003399_21_390 | 425606 | 427543 | - | 3.A.1.122.12 |
| TC | MGYG000003399_21 | MGYG000003399_21_391 | 427540 | 428730 | - | 3.A.1.122.12 |
Gene ID: MGYG000003399_21_386
Type: CAZyme
Location: 419567 - 421192 (-)
Type: CAZyme
Location: 419567 - 421192 (-)
Gene ID: MGYG000003399_21_387
Type: TF
Location: 421301 - 422227 (-)
Type: TF
Location: 421301 - 422227 (-)
Gene ID: MGYG000003399_21_388
Type: TC
Location: 422326 - 423828 (-)
Type: TC
Location: 422326 - 423828 (-)
Gene ID: MGYG000003399_21_389
Type: pfam
Location: 424235 - 425602 (-)
Type: pfam
Location: 424235 - 425602 (-)
Gene ID: MGYG000003399_21_390
Type: TC
Location: 425606 - 427543 (-)
Type: TC
Location: 425606 - 427543 (-)
Gene ID: MGYG000003399_21_391
Type: TC
Location: 427540 - 428730 (-)
Type: TC
Location: 427540 - 428730 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia
Species
Serratia ureilytica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.