Cluster: MGYG000003399_CGC36
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003399
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003399_21 | MGYG000003399_21_139 | 135018 | 136850 | + | 9.B.22.2.1 |
| pfam | MGYG000003399_21 | MGYG000003399_21_140 | 137253 | 138320 | + | Acyl_transf_3 |
| TC | MGYG000003399_21 | MGYG000003399_21_141 | 138539 | 139891 | + | 2.A.61.1.1 |
| TC | MGYG000003399_21 | MGYG000003399_21_142 | 139923 | 141506 | - | 2.A.109.2.3 |
| pfam | MGYG000003399_21 | MGYG000003399_21_143 | 142122 | 143024 | + | NTP_transferase |
| pfam | MGYG000003399_21 | MGYG000003399_21_144 | 143080 | 143973 | + | NTP_transferase |
| TC | MGYG000003399_21 | MGYG000003399_21_145 | 144249 | 145385 | + | 1.B.18.3.1 |
| TC | MGYG000003399_21 | MGYG000003399_21_146 | 145843 | 148008 | + | 8.A.3.3.2 |
| CAZyme | MGYG000003399_21 | MGYG000003399_21_147 | 148241 | 149290 | + | GT4 |
| NULL(UNKNOWN) | MGYG000003399_21 | MGYG000003399_21_148 | 149346 | 150758 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003399_21 | MGYG000003399_21_149 | 150828 | 151880 | + | GT4 |
Gene ID: MGYG000003399_21_139
Type: TC
Location: 135018 - 136850 (+)
Type: TC
Location: 135018 - 136850 (+)
Gene ID: MGYG000003399_21_140
Type: pfam
Location: 137253 - 138320 (+)
Type: pfam
Location: 137253 - 138320 (+)
Gene ID: MGYG000003399_21_141
Type: TC
Location: 138539 - 139891 (+)
Type: TC
Location: 138539 - 139891 (+)
Gene ID: MGYG000003399_21_142
Type: TC
Location: 139923 - 141506 (-)
Type: TC
Location: 139923 - 141506 (-)
Gene ID: MGYG000003399_21_143
Type: pfam
Location: 142122 - 143024 (+)
Type: pfam
Location: 142122 - 143024 (+)
Gene ID: MGYG000003399_21_144
Type: pfam
Location: 143080 - 143973 (+)
Type: pfam
Location: 143080 - 143973 (+)
Gene ID: MGYG000003399_21_145
Type: TC
Location: 144249 - 145385 (+)
Type: TC
Location: 144249 - 145385 (+)
Gene ID: MGYG000003399_21_146
Type: TC
Location: 145843 - 148008 (+)
Type: TC
Location: 145843 - 148008 (+)
Gene ID: MGYG000003399_21_147
Type: CAZyme
Location: 148241 - 149290 (+)
Type: CAZyme
Location: 148241 - 149290 (+)
Gene ID: MGYG000003399_21_148
Type:
Location: 149346 - 150758 (+)
Type:
Location: 149346 - 150758 (+)
Gene ID: MGYG000003399_21_149
Type: CAZyme
Location: 150828 - 151880 (+)
Type: CAZyme
Location: 150828 - 151880 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia
Species
Serratia ureilytica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.