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Cluster: MGYG000003397.1_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003397.1_27 MGYG000003397.1_27_74 88681 89622 + 3.A.1.15.8
TC MGYG000003397.1_27 MGYG000003397.1_27_75 89619 90368 + 3.A.1.15.8
TC MGYG000003397.1_27 MGYG000003397.1_27_76 90377 91225 + 3.A.1.15.8
TC MGYG000003397.1_27 MGYG000003397.1_27_77 91222 92067 + 3.A.1.15.8
TC MGYG000003397.1_27 MGYG000003397.1_27_78 92263 94347 - 2.A.67.4.1
pfam MGYG000003397.1_27 MGYG000003397.1_27_79 94544 95323 + PdaC
CAZyme MGYG000003397.1_27 MGYG000003397.1_27_80 95467 96279 - GT51
pfam MGYG000003397.1_27 MGYG000003397.1_27_81 96636 97850 + Arginosuc_synth | Arginosuc_syn_C
pfam MGYG000003397.1_27 MGYG000003397.1_27_82 97850 99271 + Lyase_1 | ASL_C2
TC MGYG000003397.1_27 MGYG000003397.1_27_83 99429 100487 - 9.B.145.1.2
NULL(UNKNOWN) MGYG000003397.1_27 MGYG000003397.1_27_84 100853 101050 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000003397.1_27 MGYG000003397.1_27_85 101496 102506 - 2.A.98.1.4
pfam MGYG000003397.1_27 MGYG000003397.1_27_86 102843 103598 + Exo_endo_phos
TC MGYG000003397.1_27 MGYG000003397.1_27_87 103620 104285 + 3.A.1.139.2
TC MGYG000003397.1_27 MGYG000003397.1_27_88 104272 105045 + 3.A.1.139.2
Gene ID: MGYG000003397.1_27_74
Type: TC
Location: 88681 - 89622 (+)
Gene ID: MGYG000003397.1_27_75
Type: TC
Location: 89619 - 90368 (+)
Gene ID: MGYG000003397.1_27_76
Type: TC
Location: 90377 - 91225 (+)
Gene ID: MGYG000003397.1_27_77
Type: TC
Location: 91222 - 92067 (+)
Gene ID: MGYG000003397.1_27_78
Type: TC
Location: 92263 - 94347 (-)
Gene ID: MGYG000003397.1_27_79
Type: pfam
Location: 94544 - 95323 (+)
Gene ID: MGYG000003397.1_27_80
Type: CAZyme
Location: 95467 - 96279 (-)
Gene ID: MGYG000003397.1_27_81
Type: pfam
Location: 96636 - 97850 (+)
Gene ID: MGYG000003397.1_27_82
Type: pfam
Location: 97850 - 99271 (+)
Gene ID: MGYG000003397.1_27_83
Type: TC
Location: 99429 - 100487 (-)
Gene ID: MGYG000003397.1_27_84
Type:
Location: 100853 - 101050 (+)
Gene ID: MGYG000003397.1_27_85
Type: TC
Location: 101496 - 102506 (-)
Gene ID: MGYG000003397.1_27_86
Type: pfam
Location: 102843 - 103598 (+)
Gene ID: MGYG000003397.1_27_87
Type: TC
Location: 103620 - 104285 (+)
Gene ID: MGYG000003397.1_27_88
Type: TC
Location: 104272 - 105045 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Veillonellales
→
Family
Veillonellaceae
→
Genus
F0422
→
Species
F0422 sp900766245

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003397.1_27_83 vegetarian > omnivore 2.22561 0.00276
MGYG000003397.1_27_83 vegetarian > vegan 1.64890 0.01380

🧭 Explore Read Mapping of CGC

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