Cluster: MGYG000003395_CGC70
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003395
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003395_93 | MGYG000003395_93_16 | 19462 | 21381 | + | 4.A.2.1.3 |
| CAZyme | MGYG000003395_93 | MGYG000003395_93_17 | 21406 | 24039 | + | GH38 |
| TC | MGYG000003395_93 | MGYG000003395_93_18 | 25047 | 26615 | + | 3.D.4.3.2 |
| TC | MGYG000003395_93 | MGYG000003395_93_19 | 26631 | 27770 | + | 3.D.4.3.2 |
| TC | MGYG000003395_93 | MGYG000003395_93_20 | 27785 | 27898 | + | 9.B.85.1.1 |
| TC | MGYG000003395_93 | MGYG000003395_93_21 | 27898 | 28191 | + | 8.A.79.1.1 |
| pfam | MGYG000003395_93 | MGYG000003395_93_22 | 28340 | 28744 | + | 4HBT | 4HBT_2 |
| TC | MGYG000003395_93 | MGYG000003395_93_23 | 28741 | 29433 | + | 1.A.30.2.2 |
| TC | MGYG000003395_93 | MGYG000003395_93_24 | 29437 | 29865 | + | 1.A.30.2.2 |
| TC | MGYG000003395_93 | MGYG000003395_93_25 | 29929 | 31203 | + | 2.C.1.2.1 |
| TC | MGYG000003395_93 | MGYG000003395_93_26 | 31335 | 32627 | + | 2.C.1.2.1 |
| TC | MGYG000003395_93 | MGYG000003395_93_27 | 32662 | 33186 | + | 2.C.1.2.1 |
| TC | MGYG000003395_93 | MGYG000003395_93_28 | 33196 | 33975 | + | 2.C.1.2.1 |
| pfam | MGYG000003395_93 | MGYG000003395_93_29 | 35196 | 36239 | + | NadA |
| TC | MGYG000003395_93 | MGYG000003395_93_30 | 36274 | 36993 | + | 4.B.1.1.1 |
| TC | MGYG000003395_93 | MGYG000003395_93_31 | 36990 | 37922 | - | 2.A.4.1.4 |
Gene ID: MGYG000003395_93_16
Type: TC
Location: 19462 - 21381 (+)
Type: TC
Location: 19462 - 21381 (+)
Gene ID: MGYG000003395_93_17
Type: CAZyme
Location: 21406 - 24039 (+)
Type: CAZyme
Location: 21406 - 24039 (+)
Gene ID: MGYG000003395_93_18
Type: TC
Location: 25047 - 26615 (+)
Type: TC
Location: 25047 - 26615 (+)
Gene ID: MGYG000003395_93_19
Type: TC
Location: 26631 - 27770 (+)
Type: TC
Location: 26631 - 27770 (+)
Gene ID: MGYG000003395_93_20
Type: TC
Location: 27785 - 27898 (+)
Type: TC
Location: 27785 - 27898 (+)
Gene ID: MGYG000003395_93_21
Type: TC
Location: 27898 - 28191 (+)
Type: TC
Location: 27898 - 28191 (+)
Gene ID: MGYG000003395_93_22
Type: pfam
Location: 28340 - 28744 (+)
Type: pfam
Location: 28340 - 28744 (+)
Gene ID: MGYG000003395_93_23
Type: TC
Location: 28741 - 29433 (+)
Type: TC
Location: 28741 - 29433 (+)
Gene ID: MGYG000003395_93_24
Type: TC
Location: 29437 - 29865 (+)
Type: TC
Location: 29437 - 29865 (+)
Gene ID: MGYG000003395_93_25
Type: TC
Location: 29929 - 31203 (+)
Type: TC
Location: 29929 - 31203 (+)
Gene ID: MGYG000003395_93_26
Type: TC
Location: 31335 - 32627 (+)
Type: TC
Location: 31335 - 32627 (+)
Gene ID: MGYG000003395_93_27
Type: TC
Location: 32662 - 33186 (+)
Type: TC
Location: 32662 - 33186 (+)
Gene ID: MGYG000003395_93_28
Type: TC
Location: 33196 - 33975 (+)
Type: TC
Location: 33196 - 33975 (+)
Gene ID: MGYG000003395_93_29
Type: pfam
Location: 35196 - 36239 (+)
Type: pfam
Location: 35196 - 36239 (+)
Gene ID: MGYG000003395_93_30
Type: TC
Location: 36274 - 36993 (+)
Type: TC
Location: 36274 - 36993 (+)
Gene ID: MGYG000003395_93_31
Type: TC
Location: 36990 - 37922 (-)
Type: TC
Location: 36990 - 37922 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Superficieibacter
Species
Superficieibacter sp900766525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.