Cluster: MGYG000003395_CGC64
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003395
- CGC Family ID: CGCFAM_00473
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003395_83 | MGYG000003395_83_73 | 76193 | 76747 | + | 3.D.1.9.2 |
| STP | MGYG000003395_83 | MGYG000003395_83_74 | 76666 | 77916 | - | Aminotran_1_2 |
| CAZyme | MGYG000003395_83 | MGYG000003395_83_75 | 78085 | 80118 | - | GH13_19 |
| CAZyme | MGYG000003395_83 | MGYG000003395_83_76 | 80684 | 81256 | + | GH73 |
| TF | MGYG000003395_83 | MGYG000003395_83_77 | 81311 | 82489 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000003395_83 | MGYG000003395_83_78 | 82574 | 83755 | - | 3.A.1.2.4 |
| TC | MGYG000003395_83 | MGYG000003395_83_79 | 83733 | 85274 | - | 3.A.1.2.4 |
| TC | MGYG000003395_83 | MGYG000003395_83_80 | 85353 | 86345 | - | 3.A.1.2.4 |
| NULL(UNKNOWN) | MGYG000003395_83 | MGYG000003395_83_81 | 86719 | 88041 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003395_83 | MGYG000003395_83_82 | 88094 | 89548 | + | FGGY_N | FGGY_C |
| TC | MGYG000003395_83 | MGYG000003395_83_83 | 89726 | 90106 | + | 9.B.44.1.1 |
| TC | MGYG000003395_83 | MGYG000003395_83_84 | 90147 | 90581 | + | 9.B.44.1.1 |
| TC | MGYG000003395_83 | MGYG000003395_83_85 | 90624 | 91619 | - | 9.B.97.1.1 |
Gene ID: MGYG000003395_83_73
Type: TC
Location: 76193 - 76747 (+)
Type: TC
Location: 76193 - 76747 (+)
Gene ID: MGYG000003395_83_74
Type: STP
Location: 76666 - 77916 (-)
Type: STP
Location: 76666 - 77916 (-)
Gene ID: MGYG000003395_83_75
Type: CAZyme
Location: 78085 - 80118 (-)
Type: CAZyme
Location: 78085 - 80118 (-)
Gene ID: MGYG000003395_83_76
Type: CAZyme
Location: 80684 - 81256 (+)
Type: CAZyme
Location: 80684 - 81256 (+)
Gene ID: MGYG000003395_83_77
Type: TF
Location: 81311 - 82489 (-)
Type: TF
Location: 81311 - 82489 (-)
Gene ID: MGYG000003395_83_78
Type: TC
Location: 82574 - 83755 (-)
Type: TC
Location: 82574 - 83755 (-)
Gene ID: MGYG000003395_83_79
Type: TC
Location: 83733 - 85274 (-)
Type: TC
Location: 83733 - 85274 (-)
Gene ID: MGYG000003395_83_80
Type: TC
Location: 85353 - 86345 (-)
Type: TC
Location: 85353 - 86345 (-)
Gene ID: MGYG000003395_83_81
Type:
Location: 86719 - 88041 (+)
Type:
Location: 86719 - 88041 (+)
Gene ID: MGYG000003395_83_82
Type: pfam
Location: 88094 - 89548 (+)
Type: pfam
Location: 88094 - 89548 (+)
Gene ID: MGYG000003395_83_83
Type: TC
Location: 89726 - 90106 (+)
Type: TC
Location: 89726 - 90106 (+)
Gene ID: MGYG000003395_83_84
Type: TC
Location: 90147 - 90581 (+)
Type: TC
Location: 90147 - 90581 (+)
Gene ID: MGYG000003395_83_85
Type: TC
Location: 90624 - 91619 (-)
Type: TC
Location: 90624 - 91619 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Superficieibacter
Species
Superficieibacter sp900766525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.