Cluster: MGYG000003395_CGC59
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003395
- CGC Family ID: CGCFAM_00435
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003395_77 | MGYG000003395_77_45 | 50561 | 51358 | + | 3.A.1.13.1 |
| TC | MGYG000003395_77 | MGYG000003395_77_46 | 51361 | 51972 | + | 1.A.62.2.2 |
| pfam | MGYG000003395_77 | MGYG000003395_77_47 | 52001 | 52432 | - | DUF3617 |
| pfam | MGYG000003395_77 | MGYG000003395_77_48 | 52549 | 52893 | - | Fe-S_biosyn |
| TC | MGYG000003395_77 | MGYG000003395_77_49 | 52975 | 54384 | - | 2.A.49.5.5 |
| pfam | MGYG000003395_77 | MGYG000003395_77_50 | 54553 | 55833 | + | Aminotran_3 |
| TC | MGYG000003395_77 | MGYG000003395_77_51 | 56160 | 58142 | - | 3.A.1.14.3 |
| TC | MGYG000003395_77 | MGYG000003395_77_52 | 58139 | 59029 | - | 3.A.1.14.3 |
| TC | MGYG000003395_77 | MGYG000003395_77_53 | 59029 | 59856 | - | 3.A.1.14.3 |
| TC | MGYG000003395_77 | MGYG000003395_77_54 | 59881 | 62073 | - | 1.B.14.1.2 |
| pfam | MGYG000003395_77 | MGYG000003395_77_55 | 62282 | 63289 | - | Fimbrial |
| TC | MGYG000003395_77 | MGYG000003395_77_56 | 63286 | 65724 | - | 1.B.11.3.6 |
| pfam | MGYG000003395_77 | MGYG000003395_77_57 | 65790 | 66503 | - | PapD_N | PapD_C |
| pfam | MGYG000003395_77 | MGYG000003395_77_58 | 66762 | 67331 | - | Fimbrial |
| CAZyme | MGYG000003395_77 | MGYG000003395_77_59 | 67676 | 70210 | - | GT51 |
Gene ID: MGYG000003395_77_45
Type: TC
Location: 50561 - 51358 (+)
Type: TC
Location: 50561 - 51358 (+)
Gene ID: MGYG000003395_77_46
Type: TC
Location: 51361 - 51972 (+)
Type: TC
Location: 51361 - 51972 (+)
Gene ID: MGYG000003395_77_47
Type: pfam
Location: 52001 - 52432 (-)
Type: pfam
Location: 52001 - 52432 (-)
Gene ID: MGYG000003395_77_48
Type: pfam
Location: 52549 - 52893 (-)
Type: pfam
Location: 52549 - 52893 (-)
Gene ID: MGYG000003395_77_49
Type: TC
Location: 52975 - 54384 (-)
Type: TC
Location: 52975 - 54384 (-)
Gene ID: MGYG000003395_77_50
Type: pfam
Location: 54553 - 55833 (+)
Type: pfam
Location: 54553 - 55833 (+)
Gene ID: MGYG000003395_77_51
Type: TC
Location: 56160 - 58142 (-)
Type: TC
Location: 56160 - 58142 (-)
Gene ID: MGYG000003395_77_52
Type: TC
Location: 58139 - 59029 (-)
Type: TC
Location: 58139 - 59029 (-)
Gene ID: MGYG000003395_77_53
Type: TC
Location: 59029 - 59856 (-)
Type: TC
Location: 59029 - 59856 (-)
Gene ID: MGYG000003395_77_54
Type: TC
Location: 59881 - 62073 (-)
Type: TC
Location: 59881 - 62073 (-)
Gene ID: MGYG000003395_77_55
Type: pfam
Location: 62282 - 63289 (-)
Type: pfam
Location: 62282 - 63289 (-)
Gene ID: MGYG000003395_77_56
Type: TC
Location: 63286 - 65724 (-)
Type: TC
Location: 63286 - 65724 (-)
Gene ID: MGYG000003395_77_57
Type: pfam
Location: 65790 - 66503 (-)
Type: pfam
Location: 65790 - 66503 (-)
Gene ID: MGYG000003395_77_58
Type: pfam
Location: 66762 - 67331 (-)
Type: pfam
Location: 66762 - 67331 (-)
Gene ID: MGYG000003395_77_59
Type: CAZyme
Location: 67676 - 70210 (-)
Type: CAZyme
Location: 67676 - 70210 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Superficieibacter
Species
Superficieibacter sp900766525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.