Cluster: MGYG000003395_CGC48
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000003395
- CGC Family ID: CGCFAM_01371
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003395_56 | MGYG000003395_56_152 | 173796 | 175022 | + | GT4 |
| pfam | MGYG000003395_56 | MGYG000003395_56_153 | 175024 | 176460 | + | NTP_transferase | MannoseP_isomer | Cupin_2 | NTP_transf_3 | ManC_GMP_beta-helix |
| pfam | MGYG000003395_56 | MGYG000003395_56_154 | 176674 | 178044 | + | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| TC | MGYG000003395_56 | MGYG000003395_56_155 | 178203 | 179585 | + | 9.B.18.1.1 |
| TC | MGYG000003395_56 | MGYG000003395_56_156 | 179596 | 181074 | + | 2.A.66.2.7 |
| pfam | MGYG000003395_56 | MGYG000003395_56_157 | 181097 | 182377 | + | PS_pyruv_trans |
| CAZyme | MGYG000003395_56 | MGYG000003395_56_158 | 182374 | 183594 | + | GT4 |
| NULL(UNKNOWN) | MGYG000003395_56 | MGYG000003395_56_159 | 183606 | 185012 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003395_56 | MGYG000003395_56_160 | 185160 | 186056 | + | NTP_transferase |
| TC | MGYG000003395_56 | MGYG000003395_56_161 | 186665 | 187813 | + | 2.A.66.2.10 |
| NULL(UNKNOWN) | MGYG000003395_56 | MGYG000003395_56_162 | 187806 | 188666 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000003395_56 | MGYG000003395_56_163 | 188678 | 189853 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003395_56 | MGYG000003395_56_164 | 189871 | 191037 | + | GT4 |
| pfam | MGYG000003395_56 | MGYG000003395_56_165 | 191051 | 191590 | + | Hexapep | Hexapep_2 |
| CAZyme | MGYG000003395_56 | MGYG000003395_56_166 | 191580 | 192713 | + | GT4 |
| CAZyme | MGYG000003395_56 | MGYG000003395_56_167 | 192902 | 194032 | + | GT4 |
Gene ID: MGYG000003395_56_152
Type: CAZyme
Location: 173796 - 175022 (+)
Type: CAZyme
Location: 173796 - 175022 (+)
Gene ID: MGYG000003395_56_153
Type: pfam
Location: 175024 - 176460 (+)
Type: pfam
Location: 175024 - 176460 (+)
Gene ID: MGYG000003395_56_154
Type: pfam
Location: 176674 - 178044 (+)
Type: pfam
Location: 176674 - 178044 (+)
Gene ID: MGYG000003395_56_155
Type: TC
Location: 178203 - 179585 (+)
Type: TC
Location: 178203 - 179585 (+)
Gene ID: MGYG000003395_56_156
Type: TC
Location: 179596 - 181074 (+)
Type: TC
Location: 179596 - 181074 (+)
Gene ID: MGYG000003395_56_157
Type: pfam
Location: 181097 - 182377 (+)
Type: pfam
Location: 181097 - 182377 (+)
Gene ID: MGYG000003395_56_158
Type: CAZyme
Location: 182374 - 183594 (+)
Type: CAZyme
Location: 182374 - 183594 (+)
Gene ID: MGYG000003395_56_159
Type:
Location: 183606 - 185012 (+)
Type:
Location: 183606 - 185012 (+)
Gene ID: MGYG000003395_56_160
Type: pfam
Location: 185160 - 186056 (+)
Type: pfam
Location: 185160 - 186056 (+)
Gene ID: MGYG000003395_56_161
Type: TC
Location: 186665 - 187813 (+)
Type: TC
Location: 186665 - 187813 (+)
Gene ID: MGYG000003395_56_162
Type:
Location: 187806 - 188666 (+)
Type:
Location: 187806 - 188666 (+)
Gene ID: MGYG000003395_56_163
Type:
Location: 188678 - 189853 (+)
Type:
Location: 188678 - 189853 (+)
Gene ID: MGYG000003395_56_164
Type: CAZyme
Location: 189871 - 191037 (+)
Type: CAZyme
Location: 189871 - 191037 (+)
Gene ID: MGYG000003395_56_165
Type: pfam
Location: 191051 - 191590 (+)
Type: pfam
Location: 191051 - 191590 (+)
Gene ID: MGYG000003395_56_166
Type: CAZyme
Location: 191580 - 192713 (+)
Type: CAZyme
Location: 191580 - 192713 (+)
Gene ID: MGYG000003395_56_167
Type: CAZyme
Location: 192902 - 194032 (+)
Type: CAZyme
Location: 192902 - 194032 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Superficieibacter
Species
Superficieibacter sp900766525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.