Cluster: MGYG000003395_CGC47
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003395
- CGC Family ID: CGCFAM_00695
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003395_56 | MGYG000003395_56_133 | 149795 | 151201 | - | 2.A.50.2.1 |
| STP | MGYG000003395_56 | MGYG000003395_56_134 | 151370 | 152215 | + | AlkA_N | HhH-GPD |
| TC | MGYG000003395_56 | MGYG000003395_56_135 | 152208 | 155537 | - | 9.B.34.1.1 |
| pfam | MGYG000003395_56 | MGYG000003395_56_136 | 155877 | 156518 | + | PRK |
| pfam | MGYG000003395_56 | MGYG000003395_56_137 | 156608 | 157189 | + | DCD_N | DCD |
| TC | MGYG000003395_56 | MGYG000003395_56_138 | 157216 | 159063 | + | 9.B.22.2.1 |
| TC | MGYG000003395_56 | MGYG000003395_56_139 | 159377 | 160960 | - | 2.A.109.2.3 |
| TC | MGYG000003395_56 | MGYG000003395_56_140 | 161634 | 162773 | + | 1.B.18.3.1 |
| pfam | MGYG000003395_56 | MGYG000003395_56_141 | 162780 | 163223 | + | LMWPc |
| TC | MGYG000003395_56 | MGYG000003395_56_142 | 163226 | 165388 | + | 8.A.3.3.2 |
| CAZyme | MGYG000003395_56 | MGYG000003395_56_143 | 165669 | 166514 | + | GT2 |
| pfam | MGYG000003395_56 | MGYG000003395_56_144 | 166514 | 167005 | + | Hexapep |
| CAZyme | MGYG000003395_56 | MGYG000003395_56_145 | 167002 | 168216 | + | GT4 |
| NULL(UNKNOWN) | MGYG000003395_56 | MGYG000003395_56_146 | 168191 | 169414 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003395_56 | MGYG000003395_56_147 | 169425 | 170171 | + | GT2 |
Gene ID: MGYG000003395_56_133
Type: TC
Location: 149795 - 151201 (-)
Type: TC
Location: 149795 - 151201 (-)
Gene ID: MGYG000003395_56_134
Type: STP
Location: 151370 - 152215 (+)
Type: STP
Location: 151370 - 152215 (+)
Gene ID: MGYG000003395_56_135
Type: TC
Location: 152208 - 155537 (-)
Type: TC
Location: 152208 - 155537 (-)
Gene ID: MGYG000003395_56_136
Type: pfam
Location: 155877 - 156518 (+)
Type: pfam
Location: 155877 - 156518 (+)
Gene ID: MGYG000003395_56_137
Type: pfam
Location: 156608 - 157189 (+)
Type: pfam
Location: 156608 - 157189 (+)
Gene ID: MGYG000003395_56_138
Type: TC
Location: 157216 - 159063 (+)
Type: TC
Location: 157216 - 159063 (+)
Gene ID: MGYG000003395_56_139
Type: TC
Location: 159377 - 160960 (-)
Type: TC
Location: 159377 - 160960 (-)
Gene ID: MGYG000003395_56_140
Type: TC
Location: 161634 - 162773 (+)
Type: TC
Location: 161634 - 162773 (+)
Gene ID: MGYG000003395_56_141
Type: pfam
Location: 162780 - 163223 (+)
Type: pfam
Location: 162780 - 163223 (+)
Gene ID: MGYG000003395_56_142
Type: TC
Location: 163226 - 165388 (+)
Type: TC
Location: 163226 - 165388 (+)
Gene ID: MGYG000003395_56_143
Type: CAZyme
Location: 165669 - 166514 (+)
Type: CAZyme
Location: 165669 - 166514 (+)
Gene ID: MGYG000003395_56_144
Type: pfam
Location: 166514 - 167005 (+)
Type: pfam
Location: 166514 - 167005 (+)
Gene ID: MGYG000003395_56_145
Type: CAZyme
Location: 167002 - 168216 (+)
Type: CAZyme
Location: 167002 - 168216 (+)
Gene ID: MGYG000003395_56_146
Type:
Location: 168191 - 169414 (+)
Type:
Location: 168191 - 169414 (+)
Gene ID: MGYG000003395_56_147
Type: CAZyme
Location: 169425 - 170171 (+)
Type: CAZyme
Location: 169425 - 170171 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Superficieibacter
Species
Superficieibacter sp900766525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.