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Cluster: MGYG000003395_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003395_4 MGYG000003395_4_38 38015 38839 + 1.B.10.1.1
TF MGYG000003395_4 MGYG000003395_4_39 39184 40209 + LacI
TC MGYG000003395_4 MGYG000003395_4_40 40226 41476 + 3.A.1.1.3
TC MGYG000003395_4 MGYG000003395_4_41 41556 42524 + 3.A.1.1.36
TC MGYG000003395_4 MGYG000003395_4_42 42527 43396 + 3.A.1.1.25
CAZyme MGYG000003395_4 MGYG000003395_4_43 43432 45309 + GH146
TC MGYG000003395_4 MGYG000003395_4_44 45321 46433 + 3.A.1.1.12
CAZyme MGYG000003395_4 MGYG000003395_4_45 46526 47422 + GH43_34
TC MGYG000003395_4 MGYG000003395_4_46 47498 48469 - 2.A.6.4.1
TC MGYG000003395_4 MGYG000003395_4_47 48480 50294 - 2.A.6.4.1
TC MGYG000003395_4 MGYG000003395_4_48 50355 50687 - 3.A.5.1.1
Gene ID: MGYG000003395_4_38
Type: TC
Location: 38015 - 38839 (+)
Gene ID: MGYG000003395_4_39
Type: TF
Location: 39184 - 40209 (+)
Gene ID: MGYG000003395_4_40
Type: TC
Location: 40226 - 41476 (+)
Gene ID: MGYG000003395_4_41
Type: TC
Location: 41556 - 42524 (+)
Gene ID: MGYG000003395_4_42
Type: TC
Location: 42527 - 43396 (+)
Gene ID: MGYG000003395_4_43
Type: CAZyme
Location: 43432 - 45309 (+)
Gene ID: MGYG000003395_4_44
Type: TC
Location: 45321 - 46433 (+)
Gene ID: MGYG000003395_4_45
Type: CAZyme
Location: 46526 - 47422 (+)
Gene ID: MGYG000003395_4_46
Type: TC
Location: 47498 - 48469 (-)
Gene ID: MGYG000003395_4_47
Type: TC
Location: 48480 - 50294 (-)
Gene ID: MGYG000003395_4_48
Type: TC
Location: 50355 - 50687 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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