Cluster: MGYG000003395_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003395
- CGC Family ID: CGCFAM_00263
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003395_20 | MGYG000003395_20_4 | 4780 | 5934 | + | GH177 |
| CAZyme | MGYG000003395_20 | MGYG000003395_20_5 | 5951 | 7135 | + | GH179 |
| pfam | MGYG000003395_20 | MGYG000003395_20_6 | 7132 | 8199 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| pfam | MGYG000003395_20 | MGYG000003395_20_7 | 8210 | 9232 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| TC | MGYG000003395_20 | MGYG000003395_20_8 | 9312 | 10859 | + | 2.A.2.5.2 |
| TC | MGYG000003395_20 | MGYG000003395_20_9 | 11038 | 12375 | + | 9.A.40.2.2 |
Gene ID: MGYG000003395_20_4
Type: CAZyme
Location: 4780 - 5934 (+)
Type: CAZyme
Location: 4780 - 5934 (+)
Gene ID: MGYG000003395_20_5
Type: CAZyme
Location: 5951 - 7135 (+)
Type: CAZyme
Location: 5951 - 7135 (+)
Gene ID: MGYG000003395_20_6
Type: pfam
Location: 7132 - 8199 (+)
Type: pfam
Location: 7132 - 8199 (+)
Gene ID: MGYG000003395_20_7
Type: pfam
Location: 8210 - 9232 (+)
Type: pfam
Location: 8210 - 9232 (+)
Gene ID: MGYG000003395_20_8
Type: TC
Location: 9312 - 10859 (+)
Type: TC
Location: 9312 - 10859 (+)
Gene ID: MGYG000003395_20_9
Type: TC
Location: 11038 - 12375 (+)
Type: TC
Location: 11038 - 12375 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Superficieibacter
Species
Superficieibacter sp900766525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.