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Cluster: MGYG000003394_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003394_8 MGYG000003394_8_1 1 648 - GT42
TC MGYG000003394_8 MGYG000003394_8_2 1047 1769 + 3.A.1.17.3
TC MGYG000003394_8 MGYG000003394_8_3 1766 2503 + 3.A.1.17.3
TC MGYG000003394_8 MGYG000003394_8_4 2525 3469 + 3.A.1.17.3
pfam MGYG000003394_8 MGYG000003394_8_5 3480 4127 + TENA_THI-4
TC MGYG000003394_8 MGYG000003394_8_6 4221 5036 - 3.A.1.15.4
TC MGYG000003394_8 MGYG000003394_8_7 5029 5877 - 3.A.1.15.4
TC MGYG000003394_8 MGYG000003394_8_8 5881 6801 - 3.A.1.15.4
TC MGYG000003394_8 MGYG000003394_8_9 6801 7682 - 3.A.1.15.4
Gene ID: MGYG000003394_8_1
Type: CAZyme
Location: 1 - 648 (-)
Gene ID: MGYG000003394_8_2
Type: TC
Location: 1047 - 1769 (+)
Gene ID: MGYG000003394_8_3
Type: TC
Location: 1766 - 2503 (+)
Gene ID: MGYG000003394_8_4
Type: TC
Location: 2525 - 3469 (+)
Gene ID: MGYG000003394_8_5
Type: pfam
Location: 3480 - 4127 (+)
Gene ID: MGYG000003394_8_6
Type: TC
Location: 4221 - 5036 (-)
Gene ID: MGYG000003394_8_7
Type: TC
Location: 5029 - 5877 (-)
Gene ID: MGYG000003394_8_8
Type: TC
Location: 5881 - 6801 (-)
Gene ID: MGYG000003394_8_9
Type: TC
Location: 6801 - 7682 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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