Cluster: MGYG000003394_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003394
- CGC Family ID: CGCFAM_01610
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003394_5 | MGYG000003394_5_82 | 88600 | 89295 | + | GT42 |
| pfam | MGYG000003394_5 | MGYG000003394_5_83 | 89468 | 90484 | + | adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | KR | GDP_Man_Dehyd |
| TC | MGYG000003394_5 | MGYG000003394_5_84 | 90626 | 91903 | + | 2.A.1.25.3 |
| pfam | MGYG000003394_5 | MGYG000003394_5_85 | 91988 | 92632 | + | ADK | ADK_lid | AAA_17 |
| TC | MGYG000003394_5 | MGYG000003394_5_86 | 92792 | 93394 | - | 5.B.5.1.2 |
Gene ID: MGYG000003394_5_82
Type: CAZyme
Location: 88600 - 89295 (+)
Type: CAZyme
Location: 88600 - 89295 (+)
Gene ID: MGYG000003394_5_83
Type: pfam
Location: 89468 - 90484 (+)
Type: pfam
Location: 89468 - 90484 (+)
Gene ID: MGYG000003394_5_84
Type: TC
Location: 90626 - 91903 (+)
Type: TC
Location: 90626 - 91903 (+)
Gene ID: MGYG000003394_5_85
Type: pfam
Location: 91988 - 92632 (+)
Type: pfam
Location: 91988 - 92632 (+)
Gene ID: MGYG000003394_5_86
Type: TC
Location: 92792 - 93394 (-)
Type: TC
Location: 92792 - 93394 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus
Species
Haemophilus influenzae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.