Cluster: MGYG000003390_CGC8
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003390
- CGC Family ID: CGCFAM_00487
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003390_7 | MGYG000003390_7_45 | 57433 | 58440 | - | GH8 |
| pfam | MGYG000003390_7 | MGYG000003390_7_46 | 58461 | 58943 | - | Cellsynth_D |
| TC | MGYG000003390_7 | MGYG000003390_7_47 | 58943 | 62923 | - | 1.B.55.3.1 |
| TC | MGYG000003390_7 | MGYG000003390_7_48 | 62938 | 65229 | - | 4.D.3.1.6 |
| CAZyme | MGYG000003390_7 | MGYG000003390_7_49 | 65226 | 67334 | - | GT2 |
| STP | MGYG000003390_7 | MGYG000003390_7_50 | 67353 | 68156 | - | CbiA |
| pfam | MGYG000003390_7 | MGYG000003390_7_51 | 68147 | 68683 | - | CBP_BcsO |
| TC | MGYG000003390_7 | MGYG000003390_7_52 | 69220 | 70236 | - | 3.A.1.5.27 |
| TC | MGYG000003390_7 | MGYG000003390_7_53 | 70223 | 71215 | - | 3.A.1.5.27 |
| TC | MGYG000003390_7 | MGYG000003390_7_54 | 71227 | 72129 | - | 3.A.1.5.39 |
| TC | MGYG000003390_7 | MGYG000003390_7_55 | 72139 | 73158 | - | 3.A.1.5.39 |
| TC | MGYG000003390_7 | MGYG000003390_7_56 | 73321 | 74928 | - | 3.A.1.5.27 |
| pfam | MGYG000003390_7 | MGYG000003390_7_57 | 75979 | 77667 | - | Sulfatase | EptA_B_N |
| pfam | MGYG000003390_7 | MGYG000003390_7_58 | 77882 | 78313 | - | OsmC |
| TC | MGYG000003390_7 | MGYG000003390_7_59 | 78399 | 79601 | - | 2.A.1.11.3 |
Gene ID: MGYG000003390_7_45
Type: CAZyme
Location: 57433 - 58440 (-)
Type: CAZyme
Location: 57433 - 58440 (-)
Gene ID: MGYG000003390_7_46
Type: pfam
Location: 58461 - 58943 (-)
Type: pfam
Location: 58461 - 58943 (-)
Gene ID: MGYG000003390_7_47
Type: TC
Location: 58943 - 62923 (-)
Type: TC
Location: 58943 - 62923 (-)
Gene ID: MGYG000003390_7_48
Type: TC
Location: 62938 - 65229 (-)
Type: TC
Location: 62938 - 65229 (-)
Gene ID: MGYG000003390_7_49
Type: CAZyme
Location: 65226 - 67334 (-)
Type: CAZyme
Location: 65226 - 67334 (-)
Gene ID: MGYG000003390_7_50
Type: STP
Location: 67353 - 68156 (-)
Type: STP
Location: 67353 - 68156 (-)
Gene ID: MGYG000003390_7_51
Type: pfam
Location: 68147 - 68683 (-)
Type: pfam
Location: 68147 - 68683 (-)
Gene ID: MGYG000003390_7_52
Type: TC
Location: 69220 - 70236 (-)
Type: TC
Location: 69220 - 70236 (-)
Gene ID: MGYG000003390_7_53
Type: TC
Location: 70223 - 71215 (-)
Type: TC
Location: 70223 - 71215 (-)
Gene ID: MGYG000003390_7_54
Type: TC
Location: 71227 - 72129 (-)
Type: TC
Location: 71227 - 72129 (-)
Gene ID: MGYG000003390_7_55
Type: TC
Location: 72139 - 73158 (-)
Type: TC
Location: 72139 - 73158 (-)
Gene ID: MGYG000003390_7_56
Type: TC
Location: 73321 - 74928 (-)
Type: TC
Location: 73321 - 74928 (-)
Gene ID: MGYG000003390_7_57
Type: pfam
Location: 75979 - 77667 (-)
Type: pfam
Location: 75979 - 77667 (-)
Gene ID: MGYG000003390_7_58
Type: pfam
Location: 77882 - 78313 (-)
Type: pfam
Location: 77882 - 78313 (-)
Gene ID: MGYG000003390_7_59
Type: TC
Location: 78399 - 79601 (-)
Type: TC
Location: 78399 - 79601 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pseudescherichia
Species
Pseudescherichia vulneris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.