Cluster: MGYG000003390_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003390
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003390_7 | MGYG000003390_7_33 | 39013 | 40299 | - | 2.A.23.1.7 |
| STP | MGYG000003390_7 | MGYG000003390_7_34 | 40456 | 42462 | - | EAL | GGDEF |
| TC | MGYG000003390_7 | MGYG000003390_7_35 | 42576 | 46103 | - | 1.B.55.3.1 |
| CAZyme | MGYG000003390_7 | MGYG000003390_7_36 | 46091 | 47194 | - | GH8 |
| TC | MGYG000003390_7 | MGYG000003390_7_37 | 47198 | 49522 | - | 4.D.3.1.6 |
| CAZyme | MGYG000003390_7 | MGYG000003390_7_38 | 49578 | 52196 | - | GT2 |
Gene ID: MGYG000003390_7_33
Type: TC
Location: 39013 - 40299 (-)
Type: TC
Location: 39013 - 40299 (-)
Gene ID: MGYG000003390_7_34
Type: STP
Location: 40456 - 42462 (-)
Type: STP
Location: 40456 - 42462 (-)
Gene ID: MGYG000003390_7_35
Type: TC
Location: 42576 - 46103 (-)
Type: TC
Location: 42576 - 46103 (-)
Gene ID: MGYG000003390_7_36
Type: CAZyme
Location: 46091 - 47194 (-)
Type: CAZyme
Location: 46091 - 47194 (-)
Gene ID: MGYG000003390_7_37
Type: TC
Location: 47198 - 49522 (-)
Type: TC
Location: 47198 - 49522 (-)
Gene ID: MGYG000003390_7_38
Type: CAZyme
Location: 49578 - 52196 (-)
Type: CAZyme
Location: 49578 - 52196 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pseudescherichia
Species
Pseudescherichia vulneris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.