Cluster: MGYG000003390_CGC54
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003390
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003390_111 | MGYG000003390_111_9 | 7330 | 8046 | - | 9.B.120.1.1 |
| pfam | MGYG000003390_111 | MGYG000003390_111_10 | 8333 | 10474 | + | OKR_DC_1 | OKR_DC_1_N | OKR_DC_1_C |
| CAZyme | MGYG000003390_111 | MGYG000003390_111_11 | 10515 | 11606 | - | GH23 |
Gene ID: MGYG000003390_111_9
Type: TC
Location: 7330 - 8046 (-)
Type: TC
Location: 7330 - 8046 (-)
Gene ID: MGYG000003390_111_10
Type: pfam
Location: 8333 - 10474 (+)
Type: pfam
Location: 8333 - 10474 (+)
Gene ID: MGYG000003390_111_11
Type: CAZyme
Location: 10515 - 11606 (-)
Type: CAZyme
Location: 10515 - 11606 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pseudescherichia
Species
Pseudescherichia vulneris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.