Cluster: MGYG000003390_CGC50
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003390
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003390_102 | MGYG000003390_102_289 | 333432 | 334889 | - | 3.A.7.19.1 |
| CAZyme | MGYG000003390_102 | MGYG000003390_102_290 | 334886 | 335809 | - | GT2 |
| NULL(UNKNOWN) | MGYG000003390_102 | MGYG000003390_102_291 | 336690 | 337013 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003390_102 | MGYG000003390_102_292 | 337402 | 338010 | + | 9.B.2.5.3 |
| TC | MGYG000003390_102 | MGYG000003390_102_293 | 338065 | 339210 | - | 1.B.1.1.22 |
| pfam | MGYG000003390_102 | MGYG000003390_102_294 | 339667 | 340164 | + | Vsr |
| TC | MGYG000003390_102 | MGYG000003390_102_295 | 340139 | 341050 | - | 2.A.7.3.22 |
| pfam | MGYG000003390_102 | MGYG000003390_102_296 | 341220 | 342140 | + | DUF808 |
| TC | MGYG000003390_102 | MGYG000003390_102_297 | 342236 | 343945 | + | 9.B.34.1.4 |
Gene ID: MGYG000003390_102_289
Type: TC
Location: 333432 - 334889 (-)
Type: TC
Location: 333432 - 334889 (-)
Gene ID: MGYG000003390_102_290
Type: CAZyme
Location: 334886 - 335809 (-)
Type: CAZyme
Location: 334886 - 335809 (-)
Gene ID: MGYG000003390_102_291
Type:
Location: 336690 - 337013 (+)
Type:
Location: 336690 - 337013 (+)
Gene ID: MGYG000003390_102_292
Type: TC
Location: 337402 - 338010 (+)
Type: TC
Location: 337402 - 338010 (+)
Gene ID: MGYG000003390_102_293
Type: TC
Location: 338065 - 339210 (-)
Type: TC
Location: 338065 - 339210 (-)
Gene ID: MGYG000003390_102_294
Type: pfam
Location: 339667 - 340164 (+)
Type: pfam
Location: 339667 - 340164 (+)
Gene ID: MGYG000003390_102_295
Type: TC
Location: 340139 - 341050 (-)
Type: TC
Location: 340139 - 341050 (-)
Gene ID: MGYG000003390_102_296
Type: pfam
Location: 341220 - 342140 (+)
Type: pfam
Location: 341220 - 342140 (+)
Gene ID: MGYG000003390_102_297
Type: TC
Location: 342236 - 343945 (+)
Type: TC
Location: 342236 - 343945 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pseudescherichia
Species
Pseudescherichia vulneris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.