dbCAN Logo

Cluster: MGYG000003390_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003390_5 MGYG000003390_5_166 175796 178003 + 1.B.14.1.15
TC MGYG000003390_5 MGYG000003390_5_167 178276 180465 + 1.B.14.1.3
TC MGYG000003390_5 MGYG000003390_5_168 180566 181960 + 2.A.3.1.1
TC MGYG000003390_5 MGYG000003390_5_169 182127 183368 + 2.A.1.10.4
pfam MGYG000003390_5 MGYG000003390_5_170 183383 184447 + AP_endonuc_2
CAZyme MGYG000003390_5 MGYG000003390_5_171 184444 185595 + GH109
TF MGYG000003390_5 MGYG000003390_5_172 185685 186665 + LacI
TC MGYG000003390_5 MGYG000003390_5_173 186668 188095 - 2.A.1.3.38
Gene ID: MGYG000003390_5_166
Type: TC
Location: 175796 - 178003 (+)
Gene ID: MGYG000003390_5_167
Type: TC
Location: 178276 - 180465 (+)
Gene ID: MGYG000003390_5_168
Type: TC
Location: 180566 - 181960 (+)
Gene ID: MGYG000003390_5_169
Type: TC
Location: 182127 - 183368 (+)
Gene ID: MGYG000003390_5_170
Type: pfam
Location: 183383 - 184447 (+)
Gene ID: MGYG000003390_5_171
Type: CAZyme
Location: 184444 - 185595 (+)
Gene ID: MGYG000003390_5_172
Type: TF
Location: 185685 - 186665 (+)
Gene ID: MGYG000003390_5_173
Type: TC
Location: 186668 - 188095 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003390_5_169 vegetarian > omnivore 1.00615 0.03299

🧭 Explore Read Mapping of CGC

← Back to Cluster List