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Cluster: MGYG000003390_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003390_70 MGYG000003390_70_19 20389 21024 - 5.A.3.2.1
TC MGYG000003390_70 MGYG000003390_70_20 21021 21926 - 5.A.3.2.1
TC MGYG000003390_70 MGYG000003390_70_21 21939 24353 - 5.A.3.2.1
TC MGYG000003390_70 MGYG000003390_70_22 24402 24989 - 5.A.3.2.1
pfam MGYG000003390_70 MGYG000003390_70_23 25180 26004 + FdhD-NarQ
pfam MGYG000003390_70 MGYG000003390_70_24 26133 26345 + YdgH_BhsA-like
TC MGYG000003390_70 MGYG000003390_70_25 26387 26710 - 2.A.78.2.3
TC MGYG000003390_70 MGYG000003390_70_26 26710 27369 - 2.A.78.2.3
TF MGYG000003390_70 MGYG000003390_70_27 27485 28033 + HTH_3
TF MGYG000003390_70 MGYG000003390_70_28 28054 29049 + LacI
CAZyme MGYG000003390_70 MGYG000003390_70_29 29154 31277 + GH36
TC MGYG000003390_70 MGYG000003390_70_30 31322 32587 + 2.A.1.5.4
pfam MGYG000003390_70 MGYG000003390_70_31 32627 32941 - rhaM
TC MGYG000003390_70 MGYG000003390_70_32 32968 33972 - 3.A.1.2.8
TC MGYG000003390_70 MGYG000003390_70_33 33969 34973 - 3.A.1.2.9
TC MGYG000003390_70 MGYG000003390_70_34 34973 36475 - 3.A.1.2.9
TC MGYG000003390_70 MGYG000003390_70_35 36544 37530 - 3.A.1.2.9
Gene ID: MGYG000003390_70_19
Type: TC
Location: 20389 - 21024 (-)
Gene ID: MGYG000003390_70_20
Type: TC
Location: 21021 - 21926 (-)
Gene ID: MGYG000003390_70_21
Type: TC
Location: 21939 - 24353 (-)
Gene ID: MGYG000003390_70_22
Type: TC
Location: 24402 - 24989 (-)
Gene ID: MGYG000003390_70_23
Type: pfam
Location: 25180 - 26004 (+)
Gene ID: MGYG000003390_70_24
Type: pfam
Location: 26133 - 26345 (+)
Gene ID: MGYG000003390_70_25
Type: TC
Location: 26387 - 26710 (-)
Gene ID: MGYG000003390_70_26
Type: TC
Location: 26710 - 27369 (-)
Gene ID: MGYG000003390_70_27
Type: TF
Location: 27485 - 28033 (+)
Gene ID: MGYG000003390_70_28
Type: TF
Location: 28054 - 29049 (+)
Gene ID: MGYG000003390_70_29
Type: CAZyme
Location: 29154 - 31277 (+)
Gene ID: MGYG000003390_70_30
Type: TC
Location: 31322 - 32587 (+)
Gene ID: MGYG000003390_70_31
Type: pfam
Location: 32627 - 32941 (-)
Gene ID: MGYG000003390_70_32
Type: TC
Location: 32968 - 33972 (-)
Gene ID: MGYG000003390_70_33
Type: TC
Location: 33969 - 34973 (-)
Gene ID: MGYG000003390_70_34
Type: TC
Location: 34973 - 36475 (-)
Gene ID: MGYG000003390_70_35
Type: TC
Location: 36544 - 37530 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003390_70_24 vegetarian > vegan 5.58775 0.01604
MGYG000003390_70_26 vegetarian > omnivore 2.00293 0.03299
MGYG000003390_70_26 vegetarian > vegan 1.35239 0.03094
MGYG000003390_70_28 vegetarian > omnivore 1.29583 0.03299
MGYG000003390_70_29 vegetarian > omnivore 1.37836 0.03299
MGYG000003390_70_30 vegetarian > vegan 1.30618 0.03094
MGYG000003390_70_30 vegetarian > omnivore 2.48838 0.03299
MGYG000003390_70_32 vegetarian > vegan 1.11331 0.03094
MGYG000003390_70_33 vegetarian > vegan 1.17531 0.03094
MGYG000003390_70_33 vegetarian > omnivore 1.88167 0.03299
MGYG000003390_70_35 vegetarian > vegan 1.37964 0.03094
MGYG000003390_70_35 vegetarian > omnivore 1.51730 0.03299

🧭 Explore Read Mapping of CGC

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