Cluster: MGYG000003390_CGC31
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003390
- CGC Family ID: CGCFAM_00426
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003390_54 | MGYG000003390_54_42 | 44118 | 45422 | + | 2.A.1.14.2 |
| CAZyme | MGYG000003390_54 | MGYG000003390_54_43 | 45438 | 47801 | + | GH31_2 |
| TC | MGYG000003390_54 | MGYG000003390_54_44 | 47894 | 49489 | - | 3.A.1.121.4 |
| peptidase | MGYG000003390_54 | MGYG000003390_54_45 | 49706 | 50626 | + | C82.UPB |
| TC | MGYG000003390_54 | MGYG000003390_54_46 | 50681 | 51721 | - | 8.A.5.1.3 |
| TC | MGYG000003390_54 | MGYG000003390_54_47 | 51825 | 53351 | - | 1.B.17.3.8 |
| TC | MGYG000003390_54 | MGYG000003390_54_48 | 53353 | 54924 | - | 2.A.1.3.2 |
| TC | MGYG000003390_54 | MGYG000003390_54_49 | 54921 | 56063 | - | 8.A.1.1.2 |
| TC | MGYG000003390_54 | MGYG000003390_54_50 | 56165 | 57274 | - | 2.A.45.2.5 |
Gene ID: MGYG000003390_54_42
Type: TC
Location: 44118 - 45422 (+)
Type: TC
Location: 44118 - 45422 (+)
Gene ID: MGYG000003390_54_43
Type: CAZyme
Location: 45438 - 47801 (+)
Type: CAZyme
Location: 45438 - 47801 (+)
Gene ID: MGYG000003390_54_44
Type: TC
Location: 47894 - 49489 (-)
Type: TC
Location: 47894 - 49489 (-)
Gene ID: MGYG000003390_54_45
Type: peptidase
Location: 49706 - 50626 (+)
Type: peptidase
Location: 49706 - 50626 (+)
Gene ID: MGYG000003390_54_46
Type: TC
Location: 50681 - 51721 (-)
Type: TC
Location: 50681 - 51721 (-)
Gene ID: MGYG000003390_54_47
Type: TC
Location: 51825 - 53351 (-)
Type: TC
Location: 51825 - 53351 (-)
Gene ID: MGYG000003390_54_48
Type: TC
Location: 53353 - 54924 (-)
Type: TC
Location: 53353 - 54924 (-)
Gene ID: MGYG000003390_54_49
Type: TC
Location: 54921 - 56063 (-)
Type: TC
Location: 54921 - 56063 (-)
Gene ID: MGYG000003390_54_50
Type: TC
Location: 56165 - 57274 (-)
Type: TC
Location: 56165 - 57274 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pseudescherichia
Species
Pseudescherichia vulneris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003390_54_46 | vegetarian > omnivore | 2.37735 | 0.03299 |
| MGYG000003390_54_48 | vegetarian > omnivore | 1.17091 | 0.03299 |
| MGYG000003390_54_48 | vegetarian > vegan | 1.05554 | 0.03094 |