dbCAN Logo

Cluster: MGYG000003390_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003390_42 MGYG000003390_42_57 55823 57163 + 2.A.8.1.8
TC MGYG000003390_42 MGYG000003390_42_58 57227 57820 - 2.A.95.1.5
pfam MGYG000003390_42 MGYG000003390_42_59 57997 59103 + Semialdhyde_dh | Semialdhyde_dhC
CAZyme MGYG000003390_42 MGYG000003390_42_60 59327 61513 + CBM48 | GH13_9
CAZyme MGYG000003390_42 MGYG000003390_42_61 61510 63486 + CBM48 | GH13_11
pfam MGYG000003390_42 MGYG000003390_42_62 63502 64785 + NTP_transferase | NTP_transf_3 | Hexapep_GlmU
CAZyme MGYG000003390_42 MGYG000003390_42_63 64878 66311 + GT5
CAZyme MGYG000003390_42 MGYG000003390_42_64 66331 68778 + GT35
pfam MGYG000003390_42 MGYG000003390_42_65 68861 70366 - DAO | DAO_C
STP MGYG000003390_42 MGYG000003390_42_66 70556 70885 + Rhodanese
TC MGYG000003390_42 MGYG000003390_42_67 70951 71766 + 9.B.104.1.1
Gene ID: MGYG000003390_42_57
Type: TC
Location: 55823 - 57163 (+)
Gene ID: MGYG000003390_42_58
Type: TC
Location: 57227 - 57820 (-)
Gene ID: MGYG000003390_42_59
Type: pfam
Location: 57997 - 59103 (+)
Gene ID: MGYG000003390_42_60
Type: CAZyme
Location: 59327 - 61513 (+)
Gene ID: MGYG000003390_42_61
Type: CAZyme
Location: 61510 - 63486 (+)
Gene ID: MGYG000003390_42_62
Type: pfam
Location: 63502 - 64785 (+)
Gene ID: MGYG000003390_42_63
Type: CAZyme
Location: 64878 - 66311 (+)
Gene ID: MGYG000003390_42_64
Type: CAZyme
Location: 66331 - 68778 (+)
Gene ID: MGYG000003390_42_65
Type: pfam
Location: 68861 - 70366 (-)
Gene ID: MGYG000003390_42_66
Type: STP
Location: 70556 - 70885 (+)
Gene ID: MGYG000003390_42_67
Type: TC
Location: 70951 - 71766 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003390_42_59 vegetarian > vegan 1.15060 0.03094

🧭 Explore Read Mapping of CGC

← Back to Cluster List