Cluster: MGYG000003390_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003390
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003390_10 | MGYG000003390_10_65 | 65552 | 66913 | - | GH4 |
| TC | MGYG000003390_10 | MGYG000003390_10_66 | 66925 | 68469 | - | 4.A.1.1.3 |
| peptidase | MGYG000003390_10 | MGYG000003390_10_67 | 68740 | 73689 | + | I39.008 |
| CAZyme | MGYG000003390_10 | MGYG000003390_10_68 | 73691 | 76015 | + | GT51 |
Gene ID: MGYG000003390_10_65
Type: CAZyme
Location: 65552 - 66913 (-)
Type: CAZyme
Location: 65552 - 66913 (-)
Gene ID: MGYG000003390_10_66
Type: TC
Location: 66925 - 68469 (-)
Type: TC
Location: 66925 - 68469 (-)
Gene ID: MGYG000003390_10_67
Type: peptidase
Location: 68740 - 73689 (+)
Type: peptidase
Location: 68740 - 73689 (+)
Gene ID: MGYG000003390_10_68
Type: CAZyme
Location: 73691 - 76015 (+)
Type: CAZyme
Location: 73691 - 76015 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pseudescherichia
Species
Pseudescherichia vulneris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003390_10_66 | vegetarian > omnivore | 2.34969 | 0.03299 |
| MGYG000003390_10_66 | vegetarian > vegan | 1.00243 | 0.03094 |