Cluster: MGYG000003390_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003390
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003390_10 | MGYG000003390_10_29 | 26768 | 28132 | + | 4.A.1.2.7 |
| pfam | MGYG000003390_10 | MGYG000003390_10_30 | 28136 | 28771 | + | HAD |
| pfam | MGYG000003390_10 | MGYG000003390_10_31 | 28832 | 29323 | + | dCMP_cyt_deam_1 | MafB19-deam |
| CAZyme | MGYG000003390_10 | MGYG000003390_10_32 | 29320 | 30960 | - | GH23 |
Gene ID: MGYG000003390_10_29
Type: TC
Location: 26768 - 28132 (+)
Type: TC
Location: 26768 - 28132 (+)
Gene ID: MGYG000003390_10_30
Type: pfam
Location: 28136 - 28771 (+)
Type: pfam
Location: 28136 - 28771 (+)
Gene ID: MGYG000003390_10_31
Type: pfam
Location: 28832 - 29323 (+)
Type: pfam
Location: 28832 - 29323 (+)
Gene ID: MGYG000003390_10_32
Type: CAZyme
Location: 29320 - 30960 (-)
Type: CAZyme
Location: 29320 - 30960 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pseudescherichia
Species
Pseudescherichia vulneris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.