Cluster: MGYG000003388_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003388
- CGC Family ID: CGCFAM_05535
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003388_5 | MGYG000003388_5_306 | 325322 | 326395 | - | 3.A.1.6.1 |
| TC | MGYG000003388_5 | MGYG000003388_5_307 | 326392 | 327252 | - | 3.A.1.6.1 |
| TC | MGYG000003388_5 | MGYG000003388_5_308 | 327337 | 328173 | - | 3.A.1.6.1 |
| pfam | MGYG000003388_5 | MGYG000003388_5_309 | 328334 | 328783 | - | DUF4124 |
| NULL(UNKNOWN) | MGYG000003388_5 | MGYG000003388_5_310 | 328796 | 329086 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003388_5 | MGYG000003388_5_311 | 329176 | 330804 | + | 3.A.1.121.4 |
| CAZyme | MGYG000003388_5 | MGYG000003388_5_312 | 330988 | 333456 | + | GH87 |
Gene ID: MGYG000003388_5_306
Type: TC
Location: 325322 - 326395 (-)
Type: TC
Location: 325322 - 326395 (-)
Gene ID: MGYG000003388_5_307
Type: TC
Location: 326392 - 327252 (-)
Type: TC
Location: 326392 - 327252 (-)
Gene ID: MGYG000003388_5_308
Type: TC
Location: 327337 - 328173 (-)
Type: TC
Location: 327337 - 328173 (-)
Gene ID: MGYG000003388_5_309
Type: pfam
Location: 328334 - 328783 (-)
Type: pfam
Location: 328334 - 328783 (-)
Gene ID: MGYG000003388_5_310
Type:
Location: 328796 - 329086 (-)
Type:
Location: 328796 - 329086 (-)
Gene ID: MGYG000003388_5_311
Type: TC
Location: 329176 - 330804 (+)
Type: TC
Location: 329176 - 330804 (+)
Gene ID: MGYG000003388_5_312
Type: CAZyme
Location: 330988 - 333456 (+)
Type: CAZyme
Location: 330988 - 333456 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Neisseriaceae
Genus
Neisseria
Species
Neisseria perflava
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.