Cluster: MGYG000003388_CGC5
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003388
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003388_5 | MGYG000003388_5_289 | 302589 | 305033 | - | 3.A.12.1.2 |
| NULL(UNKNOWN) | MGYG000003388_5 | MGYG000003388_5_290 | 305222 | 305773 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000003388_5 | MGYG000003388_5_291 | 305810 | 306163 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003388_5 | MGYG000003388_5_292 | 306211 | 308127 | - | 3.A.1.121.4 |
| TC | MGYG000003388_5 | MGYG000003388_5_293 | 308297 | 309064 | - | 3.A.1.3.28 |
| TC | MGYG000003388_5 | MGYG000003388_5_294 | 309074 | 309757 | - | 3.A.1.3.28 |
| TC | MGYG000003388_5 | MGYG000003388_5_295 | 309780 | 310604 | - | 3.A.1.3.28 |
| CAZyme | MGYG000003388_5 | MGYG000003388_5_296 | 310759 | 312669 | - | GH13_4 |
Gene ID: MGYG000003388_5_289
Type: TC
Location: 302589 - 305033 (-)
Type: TC
Location: 302589 - 305033 (-)
Gene ID: MGYG000003388_5_290
Type:
Location: 305222 - 305773 (-)
Type:
Location: 305222 - 305773 (-)
Gene ID: MGYG000003388_5_291
Type:
Location: 305810 - 306163 (-)
Type:
Location: 305810 - 306163 (-)
Gene ID: MGYG000003388_5_292
Type: TC
Location: 306211 - 308127 (-)
Type: TC
Location: 306211 - 308127 (-)
Gene ID: MGYG000003388_5_293
Type: TC
Location: 308297 - 309064 (-)
Type: TC
Location: 308297 - 309064 (-)
Gene ID: MGYG000003388_5_294
Type: TC
Location: 309074 - 309757 (-)
Type: TC
Location: 309074 - 309757 (-)
Gene ID: MGYG000003388_5_295
Type: TC
Location: 309780 - 310604 (-)
Type: TC
Location: 309780 - 310604 (-)
Gene ID: MGYG000003388_5_296
Type: CAZyme
Location: 310759 - 312669 (-)
Type: CAZyme
Location: 310759 - 312669 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Neisseriaceae
Genus
Neisseria
Species
Neisseria perflava
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.