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Cluster: MGYG000003388_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003388_5 MGYG000003388_5_60 61641 62300 - 2.A.95.1.6
TC MGYG000003388_5 MGYG000003388_5_61 62302 63453 - 2.A.103.1.2
peptidase MGYG000003388_5 MGYG000003388_5_62 63446 65494 - X52.001
pfam MGYG000003388_5 MGYG000003388_5_63 65499 65999 - MreD
TC MGYG000003388_5 MGYG000003388_5_64 66004 66846 - 9.B.157.1.3
TC MGYG000003388_5 MGYG000003388_5_65 66858 67895 - 9.B.157.1.3
pfam MGYG000003388_5 MGYG000003388_5_66 68120 68410 + GatC
pfam MGYG000003388_5 MGYG000003388_5_67 68561 70009 + Amidase
TC MGYG000003388_5 MGYG000003388_5_68 70109 70729 + 1.A.62.2.1
pfam MGYG000003388_5 MGYG000003388_5_69 70831 72261 + GatB_Yqey | GatB_N
TC MGYG000003388_5 MGYG000003388_5_70 72341 73345 + 5.B.1.3.1
CAZyme MGYG000003388_5 MGYG000003388_5_71 73586 75694 - GH23
Gene ID: MGYG000003388_5_60
Type: TC
Location: 61641 - 62300 (-)
Gene ID: MGYG000003388_5_61
Type: TC
Location: 62302 - 63453 (-)
Gene ID: MGYG000003388_5_62
Type: peptidase
Location: 63446 - 65494 (-)
Gene ID: MGYG000003388_5_63
Type: pfam
Location: 65499 - 65999 (-)
Gene ID: MGYG000003388_5_64
Type: TC
Location: 66004 - 66846 (-)
Gene ID: MGYG000003388_5_65
Type: TC
Location: 66858 - 67895 (-)
Gene ID: MGYG000003388_5_66
Type: pfam
Location: 68120 - 68410 (+)
Gene ID: MGYG000003388_5_67
Type: pfam
Location: 68561 - 70009 (+)
Gene ID: MGYG000003388_5_68
Type: TC
Location: 70109 - 70729 (+)
Gene ID: MGYG000003388_5_69
Type: pfam
Location: 70831 - 72261 (+)
Gene ID: MGYG000003388_5_70
Type: TC
Location: 72341 - 73345 (+)
Gene ID: MGYG000003388_5_71
Type: CAZyme
Location: 73586 - 75694 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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