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Cluster: MGYG000003388_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003388_13 MGYG000003388_13_13 12013 12663 - 9.B.149.1.11
pfam MGYG000003388_13 MGYG000003388_13_14 13039 14457 - Gln-synt_C | Gln-synt_N
pfam MGYG000003388_13 MGYG000003388_13_15 14655 15464 + Shikimate_DH | Shikimate_dh_N | SDH_C
CAZyme MGYG000003388_13 MGYG000003388_13_16 15467 16168 + GT51
pfam MGYG000003388_13 MGYG000003388_13_17 16208 17428 - NAPRTase | NAPRTase_N
TC MGYG000003388_13 MGYG000003388_13_18 17521 18816 - 1.A.34.1.3
NULL(UNKNOWN) MGYG000003388_13 MGYG000003388_13_19 19179 20159 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000003388_13 MGYG000003388_13_20 20166 21248 - GT9
pfam MGYG000003388_13 MGYG000003388_13_21 21445 21918 + QueF
TC MGYG000003388_13 MGYG000003388_13_22 22019 22696 + 2.A.88.8.6
Gene ID: MGYG000003388_13_13
Type: TC
Location: 12013 - 12663 (-)
Gene ID: MGYG000003388_13_14
Type: pfam
Location: 13039 - 14457 (-)
Gene ID: MGYG000003388_13_15
Type: pfam
Location: 14655 - 15464 (+)
Gene ID: MGYG000003388_13_16
Type: CAZyme
Location: 15467 - 16168 (+)
Gene ID: MGYG000003388_13_17
Type: pfam
Location: 16208 - 17428 (-)
Gene ID: MGYG000003388_13_18
Type: TC
Location: 17521 - 18816 (-)
Gene ID: MGYG000003388_13_19
Type:
Location: 19179 - 20159 (+)
Gene ID: MGYG000003388_13_20
Type: CAZyme
Location: 20166 - 21248 (-)
Gene ID: MGYG000003388_13_21
Type: pfam
Location: 21445 - 21918 (+)
Gene ID: MGYG000003388_13_22
Type: TC
Location: 22019 - 22696 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003388_13_21 vegetarian > vegan 1.18133 0.04449

🧭 Explore Read Mapping of CGC

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