dbCAN HGM

Cluster: MGYG000003379_CGC41

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	MGYG000003379_26	MGYG000003379_26_251	254666	255784	-	3.A.1.1.4
TC	MGYG000003379_26	MGYG000003379_26_252	256107	257327	+	3.A.1.1.2
TC	MGYG000003379_26	MGYG000003379_26_253	257369	258676	+	3.A.1.1.2
TC	MGYG000003379_26	MGYG000003379_26_254	258687	259538	+	3.A.1.1.2
CAZyme	MGYG000003379_26	MGYG000003379_26_255	259542	260735	+	GH53
CAZyme	MGYG000003379_26	MGYG000003379_26_256	260777	262837	+	GH42
TC	MGYG000003379_26	MGYG000003379_26_257	263041	263355	+	4.A.1.1.1
TC	MGYG000003379_26	MGYG000003379_26_258	263461	264723	-	1.B.3.1.1
TF	MGYG000003379_26	MGYG000003379_26_259	264989	266059	+	LacI
pfam	MGYG000003379_26	MGYG000003379_26_260	266184	266957	-	DUF347 \| DUF347 \| DUF347 \| DUF347
TC	MGYG000003379_26	MGYG000003379_26_261	267351	268598	+	9.B.34.1.3

Gene ID: MGYG000003379_26_251
Type: TC
Location: 254666 - 255784 (-)

Gene ID: MGYG000003379_26_252
Type: TC
Location: 256107 - 257327 (+)

Gene ID: MGYG000003379_26_253
Type: TC
Location: 257369 - 258676 (+)

Gene ID: MGYG000003379_26_254
Type: TC
Location: 258687 - 259538 (+)

Gene ID: MGYG000003379_26_255
Type: CAZyme
Location: 259542 - 260735 (+)

Gene ID: MGYG000003379_26_256
Type: CAZyme
Location: 260777 - 262837 (+)

Gene ID: MGYG000003379_26_257
Type: TC
Location: 263041 - 263355 (+)

Gene ID: MGYG000003379_26_258
Type: TC
Location: 263461 - 264723 (-)

Gene ID: MGYG000003379_26_259
Type: TF
Location: 264989 - 266059 (+)

Gene ID: MGYG000003379_26_260
Type: pfam
Location: 266184 - 266957 (-)

Gene ID: MGYG000003379_26_261
Type: TC
Location: 267351 - 268598 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.