Cluster: MGYG000003379_CGC34
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003379
- CGC Family ID: CGCFAM_05769
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003379_17 | MGYG000003379_17_41 | 36503 | 37153 | - | 3.A.1.15.3 |
| peptidase | MGYG000003379_17 | MGYG000003379_17_42 | 37540 | 39804 | + | C56.UNW |
| TC | MGYG000003379_17 | MGYG000003379_17_43 | 39890 | 41548 | - | 1.B.52.2.1 |
| TC | MGYG000003379_17 | MGYG000003379_17_44 | 41763 | 43019 | + | 1.A.23.4.5 |
| NULL(UNKNOWN) | MGYG000003379_17 | MGYG000003379_17_45 | 43055 | 43348 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003379_17 | MGYG000003379_17_46 | 43762 | 45546 | + | GH13_10 |
| CAZyme | MGYG000003379_17 | MGYG000003379_17_47 | 45543 | 48071 | + | GH13_26 |
| CAZyme | MGYG000003379_17 | MGYG000003379_17_48 | 48122 | 50197 | + | CBM48 | GH13_11 |
Gene ID: MGYG000003379_17_41
Type: TC
Location: 36503 - 37153 (-)
Type: TC
Location: 36503 - 37153 (-)
Gene ID: MGYG000003379_17_42
Type: peptidase
Location: 37540 - 39804 (+)
Type: peptidase
Location: 37540 - 39804 (+)
Gene ID: MGYG000003379_17_43
Type: TC
Location: 39890 - 41548 (-)
Type: TC
Location: 39890 - 41548 (-)
Gene ID: MGYG000003379_17_44
Type: TC
Location: 41763 - 43019 (+)
Type: TC
Location: 41763 - 43019 (+)
Gene ID: MGYG000003379_17_45
Type:
Location: 43055 - 43348 (-)
Type:
Location: 43055 - 43348 (-)
Gene ID: MGYG000003379_17_46
Type: CAZyme
Location: 43762 - 45546 (+)
Type: CAZyme
Location: 43762 - 45546 (+)
Gene ID: MGYG000003379_17_47
Type: CAZyme
Location: 45543 - 48071 (+)
Type: CAZyme
Location: 45543 - 48071 (+)
Gene ID: MGYG000003379_17_48
Type: CAZyme
Location: 48122 - 50197 (+)
Type: CAZyme
Location: 48122 - 50197 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pantoea
Species
Pantoea anthophila
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.