Cluster: MGYG000003379_CGC3
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003379
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003379_6 | MGYG000003379_6_57 | 58916 | 59707 | + | 3.A.1.3.29 |
| pfam | MGYG000003379_6 | MGYG000003379_6_58 | 59813 | 61111 | + | AstE_AspA_cat |
| CAZyme | MGYG000003379_6 | MGYG000003379_6_59 | 61209 | 65225 | - | GT4 |
| STP | MGYG000003379_6 | MGYG000003379_6_60 | 65244 | 67433 | - | Pkinase |
| TC | MGYG000003379_6 | MGYG000003379_6_61 | 67430 | 68710 | - | 3.A.1.103.6 |
| TC | MGYG000003379_6 | MGYG000003379_6_62 | 68710 | 69501 | - | 3.A.1.103.6 |
| pfam | MGYG000003379_6 | MGYG000003379_6_63 | 69992 | 71401 | - | 6PGD | NAD_binding_2 |
| CAZyme | MGYG000003379_6 | MGYG000003379_6_64 | 71537 | 72652 | - | GT4 |
| CAZyme | MGYG000003379_6 | MGYG000003379_6_65 | 72649 | 73812 | - | GT4 |
Gene ID: MGYG000003379_6_57
Type: TC
Location: 58916 - 59707 (+)
Type: TC
Location: 58916 - 59707 (+)
Gene ID: MGYG000003379_6_58
Type: pfam
Location: 59813 - 61111 (+)
Type: pfam
Location: 59813 - 61111 (+)
Gene ID: MGYG000003379_6_59
Type: CAZyme
Location: 61209 - 65225 (-)
Type: CAZyme
Location: 61209 - 65225 (-)
Gene ID: MGYG000003379_6_60
Type: STP
Location: 65244 - 67433 (-)
Type: STP
Location: 65244 - 67433 (-)
Gene ID: MGYG000003379_6_61
Type: TC
Location: 67430 - 68710 (-)
Type: TC
Location: 67430 - 68710 (-)
Gene ID: MGYG000003379_6_62
Type: TC
Location: 68710 - 69501 (-)
Type: TC
Location: 68710 - 69501 (-)
Gene ID: MGYG000003379_6_63
Type: pfam
Location: 69992 - 71401 (-)
Type: pfam
Location: 69992 - 71401 (-)
Gene ID: MGYG000003379_6_64
Type: CAZyme
Location: 71537 - 72652 (-)
Type: CAZyme
Location: 71537 - 72652 (-)
Gene ID: MGYG000003379_6_65
Type: CAZyme
Location: 72649 - 73812 (-)
Type: CAZyme
Location: 72649 - 73812 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pantoea
Species
Pantoea anthophila
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.