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Cluster: MGYG000003379_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003379_10 MGYG000003379_10_440 509106 509453 - 8.A.2.1.3
CAZyme MGYG000003379_10 MGYG000003379_10_441 509635 511266 + AA1
pfam MGYG000003379_10 MGYG000003379_10_442 511267 512550 - Cys_Met_Meta_PP
STP MGYG000003379_10 MGYG000003379_10_443 512786 513322 + Pribosyltran
TC MGYG000003379_10 MGYG000003379_10_444 513403 514134 - 2.A.53.3.8
TC MGYG000003379_10 MGYG000003379_10_445 514168 515097 + 3.A.1.105.17
TC MGYG000003379_10 MGYG000003379_10_446 515094 515864 + 3.A.1.105.17
Gene ID: MGYG000003379_10_440
Type: TC
Location: 509106 - 509453 (-)
Gene ID: MGYG000003379_10_441
Type: CAZyme
Location: 509635 - 511266 (+)
Gene ID: MGYG000003379_10_442
Type: pfam
Location: 511267 - 512550 (-)
Gene ID: MGYG000003379_10_443
Type: STP
Location: 512786 - 513322 (+)
Gene ID: MGYG000003379_10_444
Type: TC
Location: 513403 - 514134 (-)
Gene ID: MGYG000003379_10_445
Type: TC
Location: 514168 - 515097 (+)
Gene ID: MGYG000003379_10_446
Type: TC
Location: 515094 - 515864 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003379_10_446 vegan > omnivore 1.29107 0.04493

🧭 Explore Read Mapping of CGC

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