Cluster: MGYG000003379_CGC19
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003379
- CGC Family ID: CGCFAM_02531
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003379_10 | MGYG000003379_10_404 | 464974 | 466173 | - | 3.A.15.2.1 |
| TC | MGYG000003379_10 | MGYG000003379_10_405 | 466166 | 467551 | - | 3.A.15.2.1 |
| TC | MGYG000003379_10 | MGYG000003379_10_406 | 467538 | 467993 | - | 3.A.15.2.1 |
| pfam | MGYG000003379_10 | MGYG000003379_10_407 | 468210 | 469106 | - | QRPTase_C | QRPTase_N |
| pfam | MGYG000003379_10 | MGYG000003379_10_408 | 469303 | 469854 | + | Amidase_2 |
| TC | MGYG000003379_10 | MGYG000003379_10_409 | 469871 | 470725 | + | 9.B.125.1.1 |
| CAZyme | MGYG000003379_10 | MGYG000003379_10_410 | 470707 | 471666 | - | GH43_26 |
| TC | MGYG000003379_10 | MGYG000003379_10_411 | 471663 | 473075 | - | 2.A.2.3.4 |
| NULL(UNKNOWN) | MGYG000003379_10 | MGYG000003379_10_412 | 473251 | 473496 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003379_10 | MGYG000003379_10_413 | 473621 | 474976 | - | 2.A.3.1.3 |
Gene ID: MGYG000003379_10_404
Type: TC
Location: 464974 - 466173 (-)
Type: TC
Location: 464974 - 466173 (-)
Gene ID: MGYG000003379_10_405
Type: TC
Location: 466166 - 467551 (-)
Type: TC
Location: 466166 - 467551 (-)
Gene ID: MGYG000003379_10_406
Type: TC
Location: 467538 - 467993 (-)
Type: TC
Location: 467538 - 467993 (-)
Gene ID: MGYG000003379_10_407
Type: pfam
Location: 468210 - 469106 (-)
Type: pfam
Location: 468210 - 469106 (-)
Gene ID: MGYG000003379_10_408
Type: pfam
Location: 469303 - 469854 (+)
Type: pfam
Location: 469303 - 469854 (+)
Gene ID: MGYG000003379_10_409
Type: TC
Location: 469871 - 470725 (+)
Type: TC
Location: 469871 - 470725 (+)
Gene ID: MGYG000003379_10_410
Type: CAZyme
Location: 470707 - 471666 (-)
Type: CAZyme
Location: 470707 - 471666 (-)
Gene ID: MGYG000003379_10_411
Type: TC
Location: 471663 - 473075 (-)
Type: TC
Location: 471663 - 473075 (-)
Gene ID: MGYG000003379_10_412
Type:
Location: 473251 - 473496 (-)
Type:
Location: 473251 - 473496 (-)
Gene ID: MGYG000003379_10_413
Type: TC
Location: 473621 - 474976 (-)
Type: TC
Location: 473621 - 474976 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pantoea
Species
Pantoea anthophila
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.