Cluster: MGYG000003379_CGC16
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003379
- CGC Family ID: CGCFAM_02218
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003379_10 | MGYG000003379_10_317 | 355821 | 357488 | - | 3.A.1.120.6 |
| TF | MGYG000003379_10 | MGYG000003379_10_318 | 357678 | 358448 | - | HTH_DeoR |
| TC | MGYG000003379_10 | MGYG000003379_10_319 | 358654 | 359352 | - | 3.A.1.4.4 |
| TC | MGYG000003379_10 | MGYG000003379_10_320 | 359354 | 360145 | - | 3.A.1.4.4 |
| TC | MGYG000003379_10 | MGYG000003379_10_321 | 360142 | 361215 | - | 3.A.1.4.4 |
| TC | MGYG000003379_10 | MGYG000003379_10_322 | 361215 | 362780 | - | 3.A.1.4.4 |
| TC | MGYG000003379_10 | MGYG000003379_10_323 | 362872 | 364140 | - | 3.A.1.4.4 |
| TF | MGYG000003379_10 | MGYG000003379_10_324 | 364168 | 364869 | - | GntR |
| sulfatase | MGYG000003379_10 | MGYG000003379_10_325 | 364879 | 368496 | - | S1_37 |
| TC | MGYG000003379_10 | MGYG000003379_10_326 | 368499 | 370292 | - | 3.A.9.1.1 |
| CAZyme | MGYG000003379_10 | MGYG000003379_10_327 | 370563 | 372482 | + | GH23 |
Gene ID: MGYG000003379_10_317
Type: TC
Location: 355821 - 357488 (-)
Type: TC
Location: 355821 - 357488 (-)
Gene ID: MGYG000003379_10_318
Type: TF
Location: 357678 - 358448 (-)
Type: TF
Location: 357678 - 358448 (-)
Gene ID: MGYG000003379_10_319
Type: TC
Location: 358654 - 359352 (-)
Type: TC
Location: 358654 - 359352 (-)
Gene ID: MGYG000003379_10_320
Type: TC
Location: 359354 - 360145 (-)
Type: TC
Location: 359354 - 360145 (-)
Gene ID: MGYG000003379_10_321
Type: TC
Location: 360142 - 361215 (-)
Type: TC
Location: 360142 - 361215 (-)
Gene ID: MGYG000003379_10_322
Type: TC
Location: 361215 - 362780 (-)
Type: TC
Location: 361215 - 362780 (-)
Gene ID: MGYG000003379_10_323
Type: TC
Location: 362872 - 364140 (-)
Type: TC
Location: 362872 - 364140 (-)
Gene ID: MGYG000003379_10_324
Type: TF
Location: 364168 - 364869 (-)
Type: TF
Location: 364168 - 364869 (-)
Gene ID: MGYG000003379_10_325
Type: sulfatase
Location: 364879 - 368496 (-)
Type: sulfatase
Location: 364879 - 368496 (-)
Gene ID: MGYG000003379_10_326
Type: TC
Location: 368499 - 370292 (-)
Type: TC
Location: 368499 - 370292 (-)
Gene ID: MGYG000003379_10_327
Type: CAZyme
Location: 370563 - 372482 (+)
Type: CAZyme
Location: 370563 - 372482 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pantoea
Species
Pantoea anthophila
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.