Cluster: MGYG000003379_CGC13
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003379
- CGC Family ID: CGCFAM_00487
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003379_9 | MGYG000003379_9_83 | 100448 | 101455 | - | GH8 |
| pfam | MGYG000003379_9 | MGYG000003379_9_84 | 101464 | 101907 | - | Cellsynth_D |
| TC | MGYG000003379_9 | MGYG000003379_9_85 | 101907 | 105710 | - | 1.B.55.3.1 |
| TC | MGYG000003379_9 | MGYG000003379_9_86 | 105722 | 108676 | - | 4.D.3.1.6 |
| CAZyme | MGYG000003379_9 | MGYG000003379_9_87 | 108673 | 110784 | - | GT2 |
| STP | MGYG000003379_9 | MGYG000003379_9_88 | 110837 | 111640 | - | CbiA |
| pfam | MGYG000003379_9 | MGYG000003379_9_89 | 111631 | 112245 | - | CBP_BcsO |
| TC | MGYG000003379_9 | MGYG000003379_9_90 | 112699 | 113721 | - | 3.A.1.5.27 |
| TC | MGYG000003379_9 | MGYG000003379_9_91 | 113711 | 114697 | - | 3.A.1.5.27 |
| TC | MGYG000003379_9 | MGYG000003379_9_92 | 114710 | 115612 | - | 3.A.1.5.39 |
| TC | MGYG000003379_9 | MGYG000003379_9_93 | 115622 | 116641 | - | 3.A.1.5.39 |
| TC | MGYG000003379_9 | MGYG000003379_9_94 | 116813 | 118423 | - | 3.A.1.5.39 |
Gene ID: MGYG000003379_9_83
Type: CAZyme
Location: 100448 - 101455 (-)
Type: CAZyme
Location: 100448 - 101455 (-)
Gene ID: MGYG000003379_9_84
Type: pfam
Location: 101464 - 101907 (-)
Type: pfam
Location: 101464 - 101907 (-)
Gene ID: MGYG000003379_9_85
Type: TC
Location: 101907 - 105710 (-)
Type: TC
Location: 101907 - 105710 (-)
Gene ID: MGYG000003379_9_86
Type: TC
Location: 105722 - 108676 (-)
Type: TC
Location: 105722 - 108676 (-)
Gene ID: MGYG000003379_9_87
Type: CAZyme
Location: 108673 - 110784 (-)
Type: CAZyme
Location: 108673 - 110784 (-)
Gene ID: MGYG000003379_9_88
Type: STP
Location: 110837 - 111640 (-)
Type: STP
Location: 110837 - 111640 (-)
Gene ID: MGYG000003379_9_89
Type: pfam
Location: 111631 - 112245 (-)
Type: pfam
Location: 111631 - 112245 (-)
Gene ID: MGYG000003379_9_90
Type: TC
Location: 112699 - 113721 (-)
Type: TC
Location: 112699 - 113721 (-)
Gene ID: MGYG000003379_9_91
Type: TC
Location: 113711 - 114697 (-)
Type: TC
Location: 113711 - 114697 (-)
Gene ID: MGYG000003379_9_92
Type: TC
Location: 114710 - 115612 (-)
Type: TC
Location: 114710 - 115612 (-)
Gene ID: MGYG000003379_9_93
Type: TC
Location: 115622 - 116641 (-)
Type: TC
Location: 115622 - 116641 (-)
Gene ID: MGYG000003379_9_94
Type: TC
Location: 116813 - 118423 (-)
Type: TC
Location: 116813 - 118423 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pantoea
Species
Pantoea anthophila
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.