Cluster: MGYG000003379_CGC12
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003379
- CGC Family ID: CGCFAM_00447
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003379_9 | MGYG000003379_9_67 | 74920 | 76980 | - | 9.B.121.1.1 |
| STP | MGYG000003379_9 | MGYG000003379_9_68 | 77044 | 77817 | - | EAL |
| STP | MGYG000003379_9 | MGYG000003379_9_69 | 78098 | 79030 | + | PfkB |
| TC | MGYG000003379_9 | MGYG000003379_9_70 | 79002 | 80774 | - | 3.A.1.106.1 |
| peptidase | MGYG000003379_9 | MGYG000003379_9_71 | 81255 | 82127 | + | S09.UPW |
| peptidase | MGYG000003379_9 | MGYG000003379_9_72 | 82130 | 83623 | - | M16.UNW |
| TC | MGYG000003379_9 | MGYG000003379_9_73 | 83870 | 85159 | - | 2.A.23.1.7 |
| STP | MGYG000003379_9 | MGYG000003379_9_74 | 85385 | 87391 | - | EAL | GGDEF |
| TC | MGYG000003379_9 | MGYG000003379_9_75 | 87509 | 90985 | - | 1.B.55.3.1 |
| TC | MGYG000003379_9 | MGYG000003379_9_76 | 90969 | 93260 | - | 4.D.3.1.6 |
| CAZyme | MGYG000003379_9 | MGYG000003379_9_77 | 93270 | 95864 | - | GT2 |
Gene ID: MGYG000003379_9_67
Type: TC
Location: 74920 - 76980 (-)
Type: TC
Location: 74920 - 76980 (-)
Gene ID: MGYG000003379_9_68
Type: STP
Location: 77044 - 77817 (-)
Type: STP
Location: 77044 - 77817 (-)
Gene ID: MGYG000003379_9_69
Type: STP
Location: 78098 - 79030 (+)
Type: STP
Location: 78098 - 79030 (+)
Gene ID: MGYG000003379_9_70
Type: TC
Location: 79002 - 80774 (-)
Type: TC
Location: 79002 - 80774 (-)
Gene ID: MGYG000003379_9_71
Type: peptidase
Location: 81255 - 82127 (+)
Type: peptidase
Location: 81255 - 82127 (+)
Gene ID: MGYG000003379_9_72
Type: peptidase
Location: 82130 - 83623 (-)
Type: peptidase
Location: 82130 - 83623 (-)
Gene ID: MGYG000003379_9_73
Type: TC
Location: 83870 - 85159 (-)
Type: TC
Location: 83870 - 85159 (-)
Gene ID: MGYG000003379_9_74
Type: STP
Location: 85385 - 87391 (-)
Type: STP
Location: 85385 - 87391 (-)
Gene ID: MGYG000003379_9_75
Type: TC
Location: 87509 - 90985 (-)
Type: TC
Location: 87509 - 90985 (-)
Gene ID: MGYG000003379_9_76
Type: TC
Location: 90969 - 93260 (-)
Type: TC
Location: 90969 - 93260 (-)
Gene ID: MGYG000003379_9_77
Type: CAZyme
Location: 93270 - 95864 (-)
Type: CAZyme
Location: 93270 - 95864 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pantoea
Species
Pantoea anthophila
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.