Cluster: MGYG000003378_CGC63
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003378
- CGC Family ID: CGCFAM_00785
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003378_123 | MGYG000003378_123_24 | 25657 | 26748 | - | 3.A.1.1.46 |
| pfam | MGYG000003378_123 | MGYG000003378_123_25 | 26751 | 27452 | - | Hydrolase | HAD_2 |
| CAZyme | MGYG000003378_123 | MGYG000003378_123_26 | 27462 | 29708 | - | GH65 |
| CAZyme | MGYG000003378_123 | MGYG000003378_123_27 | 29705 | 30763 | - | GH179 |
| pfam | MGYG000003378_123 | MGYG000003378_123_28 | 30778 | 31569 | - | AP_endonuc_2 |
| pfam | MGYG000003378_123 | MGYG000003378_123_29 | 31599 | 32651 | - | ADH_zinc_N |
| TC | MGYG000003378_123 | MGYG000003378_123_30 | 32692 | 33537 | - | 3.A.1.1.46 |
| TC | MGYG000003378_123 | MGYG000003378_123_31 | 33524 | 34447 | - | 3.A.1.1.46 |
| TC | MGYG000003378_123 | MGYG000003378_123_32 | 34459 | 35751 | - | 3.A.1.1.46 |
| CAZyme | MGYG000003378_123 | MGYG000003378_123_33 | 35771 | 37450 | - | GH13_18 |
| pfam | MGYG000003378_123 | MGYG000003378_123_34 | 37660 | 37911 | - | FeoC |
| TC | MGYG000003378_123 | MGYG000003378_123_35 | 37922 | 40234 | - | 9.A.8.1.10 |
| TC | MGYG000003378_123 | MGYG000003378_123_36 | 40270 | 40494 | - | 9.A.8.1.10 |
Gene ID: MGYG000003378_123_24
Type: TC
Location: 25657 - 26748 (-)
Type: TC
Location: 25657 - 26748 (-)
Gene ID: MGYG000003378_123_25
Type: pfam
Location: 26751 - 27452 (-)
Type: pfam
Location: 26751 - 27452 (-)
Gene ID: MGYG000003378_123_26
Type: CAZyme
Location: 27462 - 29708 (-)
Type: CAZyme
Location: 27462 - 29708 (-)
Gene ID: MGYG000003378_123_27
Type: CAZyme
Location: 29705 - 30763 (-)
Type: CAZyme
Location: 29705 - 30763 (-)
Gene ID: MGYG000003378_123_28
Type: pfam
Location: 30778 - 31569 (-)
Type: pfam
Location: 30778 - 31569 (-)
Gene ID: MGYG000003378_123_29
Type: pfam
Location: 31599 - 32651 (-)
Type: pfam
Location: 31599 - 32651 (-)
Gene ID: MGYG000003378_123_30
Type: TC
Location: 32692 - 33537 (-)
Type: TC
Location: 32692 - 33537 (-)
Gene ID: MGYG000003378_123_31
Type: TC
Location: 33524 - 34447 (-)
Type: TC
Location: 33524 - 34447 (-)
Gene ID: MGYG000003378_123_32
Type: TC
Location: 34459 - 35751 (-)
Type: TC
Location: 34459 - 35751 (-)
Gene ID: MGYG000003378_123_33
Type: CAZyme
Location: 35771 - 37450 (-)
Type: CAZyme
Location: 35771 - 37450 (-)
Gene ID: MGYG000003378_123_34
Type: pfam
Location: 37660 - 37911 (-)
Type: pfam
Location: 37660 - 37911 (-)
Gene ID: MGYG000003378_123_35
Type: TC
Location: 37922 - 40234 (-)
Type: TC
Location: 37922 - 40234 (-)
Gene ID: MGYG000003378_123_36
Type: TC
Location: 40270 - 40494 (-)
Type: TC
Location: 40270 - 40494 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Chimaeribacter
Species
Chimaeribacter arupi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.