Cluster: MGYG000003378_CGC49
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003378
- CGC Family ID: CGCFAM_00123
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003378_90 | MGYG000003378_90_1 | 2 | 1318 | - | GT35 |
| CAZyme | MGYG000003378_90 | MGYG000003378_90_2 | 1445 | 2881 | - | GT5 |
| pfam | MGYG000003378_90 | MGYG000003378_90_3 | 3020 | 4315 | - | NTP_transferase | NTP_transf_3 | Hexapep_GlmU |
| CAZyme | MGYG000003378_90 | MGYG000003378_90_4 | 4336 | 6321 | - | GH13_11 |
| CAZyme | MGYG000003378_90 | MGYG000003378_90_5 | 6318 | 8507 | - | CBM48 | GH13_9 |
| pfam | MGYG000003378_90 | MGYG000003378_90_6 | 8839 | 9942 | - | Semialdhyde_dh | Semialdhyde_dhC |
| TC | MGYG000003378_90 | MGYG000003378_90_7 | 10208 | 10801 | + | 2.A.95.1.5 |
| pfam | MGYG000003378_90 | MGYG000003378_90_8 | 10853 | 11860 | - | Fimbrial |
| TC | MGYG000003378_90 | MGYG000003378_90_9 | 11874 | 14378 | - | 1.B.11.3.6 |
| pfam | MGYG000003378_90 | MGYG000003378_90_10 | 14422 | 15129 | - | PapD_N | PapD_C |
| pfam | MGYG000003378_90 | MGYG000003378_90_11 | 15192 | 15749 | - | Fimbrial |
| TC | MGYG000003378_90 | MGYG000003378_90_12 | 16048 | 17364 | - | 2.A.8.1.4 |
Gene ID: MGYG000003378_90_1
Type: CAZyme
Location: 2 - 1318 (-)
Type: CAZyme
Location: 2 - 1318 (-)
Gene ID: MGYG000003378_90_2
Type: CAZyme
Location: 1445 - 2881 (-)
Type: CAZyme
Location: 1445 - 2881 (-)
Gene ID: MGYG000003378_90_3
Type: pfam
Location: 3020 - 4315 (-)
Type: pfam
Location: 3020 - 4315 (-)
Gene ID: MGYG000003378_90_4
Type: CAZyme
Location: 4336 - 6321 (-)
Type: CAZyme
Location: 4336 - 6321 (-)
Gene ID: MGYG000003378_90_5
Type: CAZyme
Location: 6318 - 8507 (-)
Type: CAZyme
Location: 6318 - 8507 (-)
Gene ID: MGYG000003378_90_6
Type: pfam
Location: 8839 - 9942 (-)
Type: pfam
Location: 8839 - 9942 (-)
Gene ID: MGYG000003378_90_7
Type: TC
Location: 10208 - 10801 (+)
Type: TC
Location: 10208 - 10801 (+)
Gene ID: MGYG000003378_90_8
Type: pfam
Location: 10853 - 11860 (-)
Type: pfam
Location: 10853 - 11860 (-)
Gene ID: MGYG000003378_90_9
Type: TC
Location: 11874 - 14378 (-)
Type: TC
Location: 11874 - 14378 (-)
Gene ID: MGYG000003378_90_10
Type: pfam
Location: 14422 - 15129 (-)
Type: pfam
Location: 14422 - 15129 (-)
Gene ID: MGYG000003378_90_11
Type: pfam
Location: 15192 - 15749 (-)
Type: pfam
Location: 15192 - 15749 (-)
Gene ID: MGYG000003378_90_12
Type: TC
Location: 16048 - 17364 (-)
Type: TC
Location: 16048 - 17364 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Chimaeribacter
Species
Chimaeribacter arupi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.