Cluster: MGYG000003378_CGC48
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: galactan
- Genome ID: MGYG000003378
- CGC Family ID: CGCFAM_00933
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003378_89 | MGYG000003378_89_28 | 26253 | 26915 | + | 9.B.186.1.1 |
| TF | MGYG000003378_89 | MGYG000003378_89_29 | 27023 | 28027 | + | LacI |
| CAZyme | MGYG000003378_89 | MGYG000003378_89_30 | 28160 | 30286 | + | GH36 |
| TC | MGYG000003378_89 | MGYG000003378_89_31 | 30346 | 31620 | + | 2.A.1.5.4 |
Gene ID: MGYG000003378_89_28
Type: TC
Location: 26253 - 26915 (+)
Type: TC
Location: 26253 - 26915 (+)
Gene ID: MGYG000003378_89_29
Type: TF
Location: 27023 - 28027 (+)
Type: TF
Location: 27023 - 28027 (+)
Gene ID: MGYG000003378_89_30
Type: CAZyme
Location: 28160 - 30286 (+)
Type: CAZyme
Location: 28160 - 30286 (+)
Gene ID: MGYG000003378_89_31
Type: TC
Location: 30346 - 31620 (+)
Type: TC
Location: 30346 - 31620 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Chimaeribacter
Species
Chimaeribacter arupi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.