Cluster: MGYG000003378_CGC31
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003378
- CGC Family ID: CGCFAM_00733
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003378_54 | MGYG000003378_54_11 | 9378 | 11306 | - | GH23 |
| NULL(UNKNOWN) | MGYG000003378_54 | MGYG000003378_54_12 | 11410 | 11598 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003378_54 | MGYG000003378_54_13 | 11814 | 14564 | + | 3.A.3.2.41 |
| TF | MGYG000003378_54 | MGYG000003378_54_14 | 14734 | 15363 | + | GerE |
| TC | MGYG000003378_54 | MGYG000003378_54_15 | 15547 | 17214 | + | 3.A.1.120.6 |
Gene ID: MGYG000003378_54_11
Type: CAZyme
Location: 9378 - 11306 (-)
Type: CAZyme
Location: 9378 - 11306 (-)
Gene ID: MGYG000003378_54_12
Type:
Location: 11410 - 11598 (-)
Type:
Location: 11410 - 11598 (-)
Gene ID: MGYG000003378_54_13
Type: TC
Location: 11814 - 14564 (+)
Type: TC
Location: 11814 - 14564 (+)
Gene ID: MGYG000003378_54_14
Type: TF
Location: 14734 - 15363 (+)
Type: TF
Location: 14734 - 15363 (+)
Gene ID: MGYG000003378_54_15
Type: TC
Location: 15547 - 17214 (+)
Type: TC
Location: 15547 - 17214 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Chimaeribacter
Species
Chimaeribacter arupi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.