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Cluster: MGYG000003378_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003378_15 MGYG000003378_15_27 23232 24725 + GH13_5
pfam MGYG000003378_15 MGYG000003378_15_28 24766 25407 - GST_C | GST_N | GST_N_2 | GST_C_2 | GST_N_3 | GST_C_3
pfam MGYG000003378_15 MGYG000003378_15_29 25549 25842 - PmrD
TC MGYG000003378_15 MGYG000003378_15_30 26241 28655 + 1.A.23.1.1
TC MGYG000003378_15 MGYG000003378_15_31 28746 29531 - 3.A.1.11.5
TC MGYG000003378_15 MGYG000003378_15_32 29534 30403 - 3.A.1.11.5
TC MGYG000003378_15 MGYG000003378_15_33 30396 31514 - 3.A.1.11.5
TC MGYG000003378_15 MGYG000003378_15_34 31520 32533 - 3.A.1.11.5
Gene ID: MGYG000003378_15_27
Type: CAZyme
Location: 23232 - 24725 (+)
Gene ID: MGYG000003378_15_28
Type: pfam
Location: 24766 - 25407 (-)
Gene ID: MGYG000003378_15_29
Type: pfam
Location: 25549 - 25842 (-)
Gene ID: MGYG000003378_15_30
Type: TC
Location: 26241 - 28655 (+)
Gene ID: MGYG000003378_15_31
Type: TC
Location: 28746 - 29531 (-)
Gene ID: MGYG000003378_15_32
Type: TC
Location: 29534 - 30403 (-)
Gene ID: MGYG000003378_15_33
Type: TC
Location: 30396 - 31514 (-)
Gene ID: MGYG000003378_15_34
Type: TC
Location: 31520 - 32533 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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