Cluster: MGYG000003378_CGC10
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003378
- CGC Family ID: CGCFAM_00487
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003378_11 | MGYG000003378_11_6 | 7430 | 9526 | + | GT2 |
| TC | MGYG000003378_11 | MGYG000003378_11_7 | 9526 | 11862 | + | 4.D.3.1.6 |
| TC | MGYG000003378_11 | MGYG000003378_11_8 | 11849 | 15820 | + | 1.B.55.3.1 |
| pfam | MGYG000003378_11 | MGYG000003378_11_9 | 15827 | 16309 | + | Cellsynth_D |
| CAZyme | MGYG000003378_11 | MGYG000003378_11_10 | 16367 | 17374 | + | GH8 |
| TC | MGYG000003378_11 | MGYG000003378_11_11 | 17520 | 18533 | - | 3.A.1.5.27 |
| TC | MGYG000003378_11 | MGYG000003378_11_12 | 18523 | 19563 | - | 3.A.1.5.27 |
| TC | MGYG000003378_11 | MGYG000003378_11_13 | 19574 | 20491 | - | 3.A.1.5.27 |
| TC | MGYG000003378_11 | MGYG000003378_11_14 | 20502 | 21521 | - | 3.A.1.5.39 |
| TC | MGYG000003378_11 | MGYG000003378_11_15 | 21705 | 23312 | - | 3.A.1.5.39 |
| sulfatase | MGYG000003378_11 | MGYG000003378_11_16 | 24197 | 24961 | + | S1_4 |
| STP | MGYG000003378_11 | MGYG000003378_11_17 | 25018 | 26556 | + | Pyr_redox_2 |
| TC | MGYG000003378_11 | MGYG000003378_11_18 | 26948 | 27097 | + | 1.E.53.1.8 |
Gene ID: MGYG000003378_11_6
Type: CAZyme
Location: 7430 - 9526 (+)
Type: CAZyme
Location: 7430 - 9526 (+)
Gene ID: MGYG000003378_11_7
Type: TC
Location: 9526 - 11862 (+)
Type: TC
Location: 9526 - 11862 (+)
Gene ID: MGYG000003378_11_8
Type: TC
Location: 11849 - 15820 (+)
Type: TC
Location: 11849 - 15820 (+)
Gene ID: MGYG000003378_11_9
Type: pfam
Location: 15827 - 16309 (+)
Type: pfam
Location: 15827 - 16309 (+)
Gene ID: MGYG000003378_11_10
Type: CAZyme
Location: 16367 - 17374 (+)
Type: CAZyme
Location: 16367 - 17374 (+)
Gene ID: MGYG000003378_11_11
Type: TC
Location: 17520 - 18533 (-)
Type: TC
Location: 17520 - 18533 (-)
Gene ID: MGYG000003378_11_12
Type: TC
Location: 18523 - 19563 (-)
Type: TC
Location: 18523 - 19563 (-)
Gene ID: MGYG000003378_11_13
Type: TC
Location: 19574 - 20491 (-)
Type: TC
Location: 19574 - 20491 (-)
Gene ID: MGYG000003378_11_14
Type: TC
Location: 20502 - 21521 (-)
Type: TC
Location: 20502 - 21521 (-)
Gene ID: MGYG000003378_11_15
Type: TC
Location: 21705 - 23312 (-)
Type: TC
Location: 21705 - 23312 (-)
Gene ID: MGYG000003378_11_16
Type: sulfatase
Location: 24197 - 24961 (+)
Type: sulfatase
Location: 24197 - 24961 (+)
Gene ID: MGYG000003378_11_17
Type: STP
Location: 25018 - 26556 (+)
Type: STP
Location: 25018 - 26556 (+)
Gene ID: MGYG000003378_11_18
Type: TC
Location: 26948 - 27097 (+)
Type: TC
Location: 26948 - 27097 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Chimaeribacter
Species
Chimaeribacter arupi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.