Cluster: MGYG000003377_CGC73
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003377
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003377_108 | MGYG000003377_108_15 | 19707 | 20435 | + | GT51 |
| TC | MGYG000003377_108 | MGYG000003377_108_16 | 20461 | 20733 | - | 8.A.8.1.5 |
| pfam | MGYG000003377_108 | MGYG000003377_108_17 | 20730 | 21584 | - | RapZ-like_N | PapZ_C |
| TC | MGYG000003377_108 | MGYG000003377_108_18 | 21630 | 22121 | - | 4.A.2.1.7 |
| pfam | MGYG000003377_108 | MGYG000003377_108_19 | 22202 | 22489 | - | Ribosomal_S30AE |
| pfam | MGYG000003377_108 | MGYG000003377_108_20 | 22512 | 23945 | - | Sigma54_AID | Sigma54_DBD | Sigma54_CBD |
| TC | MGYG000003377_108 | MGYG000003377_108_21 | 23994 | 24719 | - | 1.B.42.1.2 |
| TC | MGYG000003377_108 | MGYG000003377_108_22 | 24726 | 25286 | - | 1.B.42.1.2 |
| TC | MGYG000003377_108 | MGYG000003377_108_23 | 25255 | 25830 | - | 1.B.42.1.2 |
| pfam | MGYG000003377_108 | MGYG000003377_108_24 | 25827 | 26393 | - | Hydrolase_3 |
| STP | MGYG000003377_108 | MGYG000003377_108_25 | 26408 | 27394 | - | CBS | CBS | SIS |
| TC | MGYG000003377_108 | MGYG000003377_108_26 | 27406 | 28383 | - | 2.A.19.5.1 |
| TC | MGYG000003377_108 | MGYG000003377_108_27 | 28614 | 29426 | + | 3.A.1.27.3 |
| TC | MGYG000003377_108 | MGYG000003377_108_28 | 29434 | 30216 | + | 3.A.1.27.3 |
| TC | MGYG000003377_108 | MGYG000003377_108_29 | 30221 | 30772 | + | 3.A.1.27.3 |
| TC | MGYG000003377_108 | MGYG000003377_108_30 | 30789 | 31424 | + | 3.A.1.27.3 |
| TC | MGYG000003377_108 | MGYG000003377_108_31 | 31424 | 31717 | + | 3.A.1.27.3 |
Gene ID: MGYG000003377_108_15
Type: CAZyme
Location: 19707 - 20435 (+)
Type: CAZyme
Location: 19707 - 20435 (+)
Gene ID: MGYG000003377_108_16
Type: TC
Location: 20461 - 20733 (-)
Type: TC
Location: 20461 - 20733 (-)
Gene ID: MGYG000003377_108_17
Type: pfam
Location: 20730 - 21584 (-)
Type: pfam
Location: 20730 - 21584 (-)
Gene ID: MGYG000003377_108_18
Type: TC
Location: 21630 - 22121 (-)
Type: TC
Location: 21630 - 22121 (-)
Gene ID: MGYG000003377_108_19
Type: pfam
Location: 22202 - 22489 (-)
Type: pfam
Location: 22202 - 22489 (-)
Gene ID: MGYG000003377_108_20
Type: pfam
Location: 22512 - 23945 (-)
Type: pfam
Location: 22512 - 23945 (-)
Gene ID: MGYG000003377_108_21
Type: TC
Location: 23994 - 24719 (-)
Type: TC
Location: 23994 - 24719 (-)
Gene ID: MGYG000003377_108_22
Type: TC
Location: 24726 - 25286 (-)
Type: TC
Location: 24726 - 25286 (-)
Gene ID: MGYG000003377_108_23
Type: TC
Location: 25255 - 25830 (-)
Type: TC
Location: 25255 - 25830 (-)
Gene ID: MGYG000003377_108_24
Type: pfam
Location: 25827 - 26393 (-)
Type: pfam
Location: 25827 - 26393 (-)
Gene ID: MGYG000003377_108_25
Type: STP
Location: 26408 - 27394 (-)
Type: STP
Location: 26408 - 27394 (-)
Gene ID: MGYG000003377_108_26
Type: TC
Location: 27406 - 28383 (-)
Type: TC
Location: 27406 - 28383 (-)
Gene ID: MGYG000003377_108_27
Type: TC
Location: 28614 - 29426 (+)
Type: TC
Location: 28614 - 29426 (+)
Gene ID: MGYG000003377_108_28
Type: TC
Location: 29434 - 30216 (+)
Type: TC
Location: 29434 - 30216 (+)
Gene ID: MGYG000003377_108_29
Type: TC
Location: 30221 - 30772 (+)
Type: TC
Location: 30221 - 30772 (+)
Gene ID: MGYG000003377_108_30
Type: TC
Location: 30789 - 31424 (+)
Type: TC
Location: 30789 - 31424 (+)
Gene ID: MGYG000003377_108_31
Type: TC
Location: 31424 - 31717 (+)
Type: TC
Location: 31424 - 31717 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Phytobacter
Species
Phytobacter sp002377245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.