Cluster: MGYG000003377_CGC69
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003377
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003377_105 | MGYG000003377_105_84 | 96071 | 97690 | - | 1.B.3.1.2 |
| TC | MGYG000003377_105 | MGYG000003377_105_85 | 97731 | 99113 | - | 2.A.2.3.3 |
| CAZyme | MGYG000003377_105 | MGYG000003377_105_86 | 99140 | 100711 | - | GH78 |
| TF | MGYG000003377_105 | MGYG000003377_105_87 | 100915 | 101742 | + | HTH_AraC |
| pfam | MGYG000003377_105 | MGYG000003377_105_88 | 102285 | 102857 | - | Flavin_Reduct |
| TC | MGYG000003377_105 | MGYG000003377_105_89 | 102903 | 104726 | - | 9.B.34.1.3 |
| NULL(UNKNOWN) | MGYG000003377_105 | MGYG000003377_105_90 | 104861 | 104953 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003377_105 | MGYG000003377_105_91 | 104953 | 105654 | + | 3.A.1.1.16 |
| TC | MGYG000003377_105 | MGYG000003377_105_92 | 105651 | 106619 | + | 3.A.1.20.3 |
| TC | MGYG000003377_105 | MGYG000003377_105_93 | 106662 | 108317 | + | 3.A.1.20.2 |
| pfam | MGYG000003377_105 | MGYG000003377_105_94 | 108393 | 109235 | + | Acetyltransf_2 |
| STP | MGYG000003377_105 | MGYG000003377_105_95 | 109217 | 109807 | - | TetR_N |
| TC | MGYG000003377_105 | MGYG000003377_105_96 | 109922 | 111424 | + | 2.A.1.3.14 |
| pfam | MGYG000003377_105 | MGYG000003377_105_97 | 111408 | 111884 | - | RES |
| pfam | MGYG000003377_105 | MGYG000003377_105_98 | 111884 | 112330 | - | Xre_MbcA_ParS_C | Xre-like-HTH |
| TC | MGYG000003377_105 | MGYG000003377_105_99 | 112396 | 113277 | - | 2.A.7.17.2 |
| TC | MGYG000003377_105 | MGYG000003377_105_100 | 113502 | 114089 | + | 5.A.3.2.1 |
| TC | MGYG000003377_105 | MGYG000003377_105_101 | 114138 | 116549 | + | 5.A.3.2.1 |
| TC | MGYG000003377_105 | MGYG000003377_105_102 | 116561 | 117445 | + | 5.A.3.2.1 |
| TC | MGYG000003377_105 | MGYG000003377_105_103 | 117438 | 118094 | + | 5.A.3.2.1 |
Gene ID: MGYG000003377_105_84
Type: TC
Location: 96071 - 97690 (-)
Type: TC
Location: 96071 - 97690 (-)
Gene ID: MGYG000003377_105_85
Type: TC
Location: 97731 - 99113 (-)
Type: TC
Location: 97731 - 99113 (-)
Gene ID: MGYG000003377_105_86
Type: CAZyme
Location: 99140 - 100711 (-)
Type: CAZyme
Location: 99140 - 100711 (-)
Gene ID: MGYG000003377_105_87
Type: TF
Location: 100915 - 101742 (+)
Type: TF
Location: 100915 - 101742 (+)
Gene ID: MGYG000003377_105_88
Type: pfam
Location: 102285 - 102857 (-)
Type: pfam
Location: 102285 - 102857 (-)
Gene ID: MGYG000003377_105_89
Type: TC
Location: 102903 - 104726 (-)
Type: TC
Location: 102903 - 104726 (-)
Gene ID: MGYG000003377_105_90
Type:
Location: 104861 - 104953 (+)
Type:
Location: 104861 - 104953 (+)
Gene ID: MGYG000003377_105_91
Type: TC
Location: 104953 - 105654 (+)
Type: TC
Location: 104953 - 105654 (+)
Gene ID: MGYG000003377_105_92
Type: TC
Location: 105651 - 106619 (+)
Type: TC
Location: 105651 - 106619 (+)
Gene ID: MGYG000003377_105_93
Type: TC
Location: 106662 - 108317 (+)
Type: TC
Location: 106662 - 108317 (+)
Gene ID: MGYG000003377_105_94
Type: pfam
Location: 108393 - 109235 (+)
Type: pfam
Location: 108393 - 109235 (+)
Gene ID: MGYG000003377_105_95
Type: STP
Location: 109217 - 109807 (-)
Type: STP
Location: 109217 - 109807 (-)
Gene ID: MGYG000003377_105_96
Type: TC
Location: 109922 - 111424 (+)
Type: TC
Location: 109922 - 111424 (+)
Gene ID: MGYG000003377_105_97
Type: pfam
Location: 111408 - 111884 (-)
Type: pfam
Location: 111408 - 111884 (-)
Gene ID: MGYG000003377_105_98
Type: pfam
Location: 111884 - 112330 (-)
Type: pfam
Location: 111884 - 112330 (-)
Gene ID: MGYG000003377_105_99
Type: TC
Location: 112396 - 113277 (-)
Type: TC
Location: 112396 - 113277 (-)
Gene ID: MGYG000003377_105_100
Type: TC
Location: 113502 - 114089 (+)
Type: TC
Location: 113502 - 114089 (+)
Gene ID: MGYG000003377_105_101
Type: TC
Location: 114138 - 116549 (+)
Type: TC
Location: 114138 - 116549 (+)
Gene ID: MGYG000003377_105_102
Type: TC
Location: 116561 - 117445 (+)
Type: TC
Location: 116561 - 117445 (+)
Gene ID: MGYG000003377_105_103
Type: TC
Location: 117438 - 118094 (+)
Type: TC
Location: 117438 - 118094 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Phytobacter
Species
Phytobacter sp002377245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.