Cluster: MGYG000003377_CGC59
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003377
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003377_91 | MGYG000003377_91_53 | 56498 | 57607 | + | 3.A.1.132.3 |
| pfam | MGYG000003377_91 | MGYG000003377_91_54 | 57627 | 58055 | - | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| TC | MGYG000003377_91 | MGYG000003377_91_55 | 58067 | 58399 | - | 2.A.113.1.1 |
| pfam | MGYG000003377_91 | MGYG000003377_91_56 | 58606 | 59622 | - | ADH_zinc_N | ADH_N | ADH_zinc_N_2 |
| TC | MGYG000003377_91 | MGYG000003377_91_57 | 60091 | 61200 | - | 3.A.1.1.4 |
| TC | MGYG000003377_91 | MGYG000003377_91_58 | 61557 | 62789 | + | 3.A.1.1.2 |
| TC | MGYG000003377_91 | MGYG000003377_91_59 | 62976 | 64283 | + | 3.A.1.1.2 |
| TC | MGYG000003377_91 | MGYG000003377_91_60 | 64293 | 65144 | + | 3.A.1.1.2 |
| CAZyme | MGYG000003377_91 | MGYG000003377_91_61 | 65149 | 66351 | + | GH53 |
| NULL(UNKNOWN) | MGYG000003377_91 | MGYG000003377_91_62 | 66450 | 66608 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003377_91 | MGYG000003377_91_63 | 66642 | 68699 | + | GH42 |
| TC | MGYG000003377_91 | MGYG000003377_91_64 | 68769 | 69083 | + | 4.A.1.1.1 |
| TC | MGYG000003377_91 | MGYG000003377_91_65 | 69241 | 70506 | - | 1.B.3.1.1 |
| TF | MGYG000003377_91 | MGYG000003377_91_66 | 70775 | 71848 | + | LacI |
| TC | MGYG000003377_91 | MGYG000003377_91_67 | 72308 | 72769 | + | 4.A.2.1.21 |
| TC | MGYG000003377_91 | MGYG000003377_91_68 | 72766 | 73089 | + | 4.A.2.1.15 |
| TC | MGYG000003377_91 | MGYG000003377_91_69 | 73103 | 74209 | + | 4.A.2.1.10 |
| CAZyme | MGYG000003377_91 | MGYG000003377_91_70 | 74240 | 76873 | + | GH38 |
| TF | MGYG000003377_91 | MGYG000003377_91_71 | 76884 | 78794 | + | HTH_11 | Mga |
| TC | MGYG000003377_91 | MGYG000003377_91_72 | 78908 | 80080 | + | 1.B.15.1.1 |
Gene ID: MGYG000003377_91_53
Type: TC
Location: 56498 - 57607 (+)
Type: TC
Location: 56498 - 57607 (+)
Gene ID: MGYG000003377_91_54
Type: pfam
Location: 57627 - 58055 (-)
Type: pfam
Location: 57627 - 58055 (-)
Gene ID: MGYG000003377_91_55
Type: TC
Location: 58067 - 58399 (-)
Type: TC
Location: 58067 - 58399 (-)
Gene ID: MGYG000003377_91_56
Type: pfam
Location: 58606 - 59622 (-)
Type: pfam
Location: 58606 - 59622 (-)
Gene ID: MGYG000003377_91_57
Type: TC
Location: 60091 - 61200 (-)
Type: TC
Location: 60091 - 61200 (-)
Gene ID: MGYG000003377_91_58
Type: TC
Location: 61557 - 62789 (+)
Type: TC
Location: 61557 - 62789 (+)
Gene ID: MGYG000003377_91_59
Type: TC
Location: 62976 - 64283 (+)
Type: TC
Location: 62976 - 64283 (+)
Gene ID: MGYG000003377_91_60
Type: TC
Location: 64293 - 65144 (+)
Type: TC
Location: 64293 - 65144 (+)
Gene ID: MGYG000003377_91_61
Type: CAZyme
Location: 65149 - 66351 (+)
Type: CAZyme
Location: 65149 - 66351 (+)
Gene ID: MGYG000003377_91_62
Type:
Location: 66450 - 66608 (+)
Type:
Location: 66450 - 66608 (+)
Gene ID: MGYG000003377_91_63
Type: CAZyme
Location: 66642 - 68699 (+)
Type: CAZyme
Location: 66642 - 68699 (+)
Gene ID: MGYG000003377_91_64
Type: TC
Location: 68769 - 69083 (+)
Type: TC
Location: 68769 - 69083 (+)
Gene ID: MGYG000003377_91_65
Type: TC
Location: 69241 - 70506 (-)
Type: TC
Location: 69241 - 70506 (-)
Gene ID: MGYG000003377_91_66
Type: TF
Location: 70775 - 71848 (+)
Type: TF
Location: 70775 - 71848 (+)
Gene ID: MGYG000003377_91_67
Type: TC
Location: 72308 - 72769 (+)
Type: TC
Location: 72308 - 72769 (+)
Gene ID: MGYG000003377_91_68
Type: TC
Location: 72766 - 73089 (+)
Type: TC
Location: 72766 - 73089 (+)
Gene ID: MGYG000003377_91_69
Type: TC
Location: 73103 - 74209 (+)
Type: TC
Location: 73103 - 74209 (+)
Gene ID: MGYG000003377_91_70
Type: CAZyme
Location: 74240 - 76873 (+)
Type: CAZyme
Location: 74240 - 76873 (+)
Gene ID: MGYG000003377_91_71
Type: TF
Location: 76884 - 78794 (+)
Type: TF
Location: 76884 - 78794 (+)
Gene ID: MGYG000003377_91_72
Type: TC
Location: 78908 - 80080 (+)
Type: TC
Location: 78908 - 80080 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Phytobacter
Species
Phytobacter sp002377245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003377_91_53 | vegetarian > vegan | 1.30727 | 0.01778 |